Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00417 ATGGACCTTTTCGATGAAGAGGATGTCCCTGTCAAACGTGGTCGGGGTCGTGGCAGATTTCAACCAAAAGCCAAACCTATGTCAGAACCAATACAGCGGATTTCTGCTTCACAAATAGCAACTTTAGGCGCCAATGAAAGGGAAACTGAACCTGCTTCTGACAACGTGGACATCAGTCGACTGCACATGAATGATGATAGACACACAAATGCAGTTGATTCAACCTTAGCAGTGTCATCCACAGAATTTCAAAAAAGTAACTGCCATTTATTAGCAGCTGAGGCAGATTCAACAAACTATGCTGTGAGTCATGTTACTAAAGTTGTTCCAGCTCCCTTTGAAAGCAATGATCTCTCCATTGGTTTGAAAACAAAGCAATCTTTTGAATCGAGTATTGTAGAAGCACATAAAATGACTAATACTTCTCAAGAACCTTCTGCACACCCAGAAGTTTCCTGTTATGACTGGAATCAGGGTTCGGTATCAGCCCGTTCTCCTTTACAATTTGGAGAATATTTTGGTTCTGCAGATGTTTCATGTACAGAAGTTACAGAGCAGAGCAATGCACAATCTTTTTTGAACTCTAGGGAACCTGCAGAGGTAAAACCTGTTGCTTTTGATCCGGATCCTTTTCGTGGTATTCTCCTTGAACCTGCTACAAACCACTTGCATGCACAAGGCAGATTTCAACCTAAGATTAAGCCTCGCCCTCGGGTTGTCACATCATCTGAATCTTCTGTTTTTCATGATGTTTCAGCAGAAAGCCCTCTGCCATCAAAACTTTCACCCCCTAATCATGATAAGGCAATGGGACTGTCCGAATCTGTCTGTGCACCATTATCTGATGAAGAAAACTTGGAATCATTAGAGCCCTCACAGCAAGGTTCCCATAATGCTTTACCTTCAATGGATACTTTTCATGATGGAGTAGGACAGTTTCATCCGAGTCCTGGAAAATGTTTGGGAGAGAGTTCGGACATTTTTTCTGGATTGGAGTCTCTTGATGATTTTCTCAGTCAAACTGCTGGGACTCATAAACCAACTATTAGGACAAATACAGAGAAAAATTTTGTTATCCAGGCTTGTAGGTTTGGTCAGTCTCCTGCATCGGGGACTTGTGGTGCTGCACAAGTTCAAATGCTTTCTGGACAGGAACACCTTCATTCAGAATTTGCTGAGGATTCTGCTGTCTTCAACAGTAGGAACGCAGAAACTGATACACCAAGATGTGAACCAGAGGAAGTTAATGTCTCAAATCCTTCATTCAATGTTGATGATGATTTCATTTGCTCATCGGTGAGTATCAGTGATGTCAATCCTCCATTTTCAAACCCTCAAATCCTGGAGCATGAAGAATTGACAAATACTGCTGGTGATCTTGGTTTGGGTGATGGTGTATTCTCTGAAGATGTTCATGAAATGCATGAAGAGGATACTATCAGAACCAGGGAAGCTTGCAGGTCAATGGATCCTCCTGGGAACTACAAAAGCTGTACTGAGGCTGCGGGGTATCAAGTTGGCAGGCAGTTAAGGAAGCCAGTAATTAGTGAAGTTGCCAGTGAGCCAACAAGTGATGCCGTTGAAAGTGGTGACACATCATCTGCTGACTTTACTAAGTCCCATGGAAATGGACGAGAAAACATTGAGGGATATGGAGTGGGTGGTATGCATGAGAAGGAAAAGGCTTGTAGAAGGTCAAACAATACAGTGGATGAAAATGGAAAATCATCTCGGAAGCGTAATAAAGAAACTGACGCTTCTGAAAAGTCAAAAGAACAACCTTGTAAAAAGTTTTCTCATTCGACTCGGCGCAGTAAAAAATATGCGGACAAGGCTTTTATAGAAGCCATGGAGGAAGAAATTGATCCAAGTACATACCGGATCAAGGACATCATCCAATATGGGGAATACCATGAGTGGAAGGCGAAGAAGGAAGCAGCATCAAGAACAACCTCTTCAAATCAAAGAAATGCGAGTTATCTTCATGTGGCTTCTCAGGACAGAGAGGAGACATTTGTTACTGAAGATGAAACAGTCCCCCGGGATGATCATGATGCTTCAGAAAGTGTTCCACTGGCTTCCTCTTTTTTCAACTATCACTCTTTCATGGTGAAAACGGCTAGAGGGAAATGGACAAAACAAGAAACTGAACTCTTCTATGATGCAATTAGGCAGTTCGGTACAGATTTTGCCATGATTCAGCAACTCTTCCCTGGTCGTGATAGGAATCAAATTAAGTTGAAGTATAAGAAGGAAGAACGCCAACACCCAGTACGACTTTTTGAGGCTGTGAACAATCGCGCCAAAGATTATTCTCATTTCAAATCGGTTATTGAACTACTTCAGAAAGCTTCTGCCTACTCAGAGGCAGAGAAGAGCAGACCCGCTTCAGTTGACTTGACTGGTGAGGAGGAGGCTGAGGATGTCACTCCTGAAACTAATGAAGAAGCAACAAAAATTGAGGAGAATATTGTACACAATAACGGAGATGTTAAAATACAACAGAATAATGGTGTTGATGATGGAAAAATAGAGAGTCCATTAAAATCAAATAATGAAAGTGATGTTGAGGATGACCTTGATTGGTGTCAATATACAAGTAATTATTAG 2610 0.4176 MDLFDEEDVPVKRGRGRGRFQPKAKPMSEPIQRISASQIATLGANERETEPASDNVDISRLHMNDDRHTNAVDSTLAVSSTEFQKSNCHLLAAEADSTNYAVSHVTKVVPAPFESNDLSIGLKTKQSFESSIVEAHKMTNTSQEPSAHPEVSCYDWNQGSVSARSPLQFGEYFGSADVSCTEVTEQSNAQSFLNSREPAEVKPVAFDPDPFRGILLEPATNHLHAQGRFQPKIKPRPRVVTSSESSVFHDVSAESPLPSKLSPPNHDKAMGLSESVCAPLSDEENLESLEPSQQGSHNALPSMDTFHDGVGQFHPSPGKCLGESSDIFSGLESLDDFLSQTAGTHKPTIRTNTEKNFVIQACRFGQSPASGTCGAAQVQMLSGQEHLHSEFAEDSAVFNSRNAETDTPRCEPEEVNVSNPSFNVDDDFICSSVSISDVNPPFSNPQILEHEELTNTAGDLGLGDGVFSEDVHEMHEEDTIRTREACRSMDPPGNYKSCTEAAGYQVGRQLRKPVISEVASEPTSDAVESGDTSSADFTKSHGNGRENIEGYGVGGMHEKEKACRRSNNTVDENGKSSRKRNKETDASEKSKEQPCKKFSHSTRRSKKYADKAFIEAMEEEIDPSTYRIKDIIQYGEYHEWKAKKEAASRTTSSNQRNASYLHVASQDREETFVTEDETVPRDDHDASESVPLASSFFNYHSFMVKTARGKWTKQETELFYDAIRQFGTDFAMIQQLFPGRDRNQIKLKYKKEERQHPVRLFEAVNNRAKDYSHFKSVIELLQKASAYSEAEKSRPASVDLTGEEEAEDVTPETNEEATKIEENIVHNNGDVKIQQNNGVDDGKIESPLKSNNESDVEDDLDWCQYTSNY* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00417 869 MobiDBLite consensus disorder prediction 1 15 - -
Pte3g00417 869 MobiDBLite consensus disorder prediction 552 603 - -
Pte3g00417 869 CDD SANT 710 751 IPR001005 -
Pte3g00417 869 ProSiteProfiles SANT domain profile. 706 754 IPR017884 -
Pte3g00417 869 MobiDBLite consensus disorder prediction 1 32 - -
Pte3g00417 869 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 15 869 - -
Pte3g00417 869 Pfam Myb DNA-binding like 701 784 IPR039467 -
Pte3g00417 869 SUPERFAMILY Homeodomain-like 709 757 IPR009057 -
Pte3g00417 869 Gene3D - 711 774 - -
Pte3g00417 869 SMART sant 707 755 IPR001005 -
Pte3g00417 869 MobiDBLite consensus disorder prediction 522 541 - -
Pte3g00417 869 MobiDBLite consensus disorder prediction 286 301 - -
Pte3g00417 869 MobiDBLite consensus disorder prediction 791 869 - -
Pte3g00417 869 MobiDBLite consensus disorder prediction 518 603 - -
Pte3g00417 869 ProSiteProfiles Myb-like domain profile. 703 753 IPR001005 -
Pte3g00417 869 MobiDBLite consensus disorder prediction 812 826 - -
Pte3g00417 869 MobiDBLite consensus disorder prediction 226 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00417 Pte-Chr3 3438575 3446282 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte3g00417 Myb_DNA-bind_7 3.4e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00417 K15198 - qsa:O6P43_011572 441.425