Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00400 ATGCGAGCAAACTATGAAATGAGCACAAAGATTATGTCAAATCCAAGAGAGGAAGCTTTTAAGGCCAAGCAAGAGGGCGACATCAGTGACGAAAAGTTTGTCAAACCCTCATATTCAAGACAGTGGTCAGGATTCCGAAATCCAAGAATTGTAAGAGTCTCACGATCCTTCGGAGGTAAAGATAGGCATAGCAAGGTTTCCACGATTAAGGGGCTAAGGGACAGGCGGATTAGGCTTTCAGTACCTACAGCTATTCAGTTGTATGATCTTCAAGATAGGCTTGGGCTTGGTCAGCCAAGCAAAGTGATTGACTGGCTCCTTGAAGCTACAAAGCATGACATCGATAAGCTCCCACCACTTCAATTTCCTCAAGGGTTTGGTGAATTTCATCCACCACAGTCGCTGGTACTGCCTTATGAATCAAGTGCCTCACAGTTTTCTCTTACTCCCAGCTTCATTGACGCTGCTTTAGCCTTAAGGGTCGGGGACAATCAAGGTTCCAATGCAAAGTCAAAATACTGGGATATGAATTTTTTGTCCAGAACCAAACTTACGGATGAAGATAGAAGAGGGTTTATATCTGAGAAAGGAAAATGCATAAAATCAACTGAAGATCATGAAAACCAAGATGGATGTGGTTATGGAAACCGGATTTCAGCTCAGAAAAGTTTCCCTATCACAAGTGAGTCTCCCTTACTTGGCTTACTGAACAATGCTGTTCCATATAGCTCTTACCATTCAGATCCTTCAAGTTTGTGTCTGTCCCATTTTGGGAGCCATGGAACGCTGTCCTCCCAATTAGAAACCAAGAATGGCAGTACTGCTGTGCCATCTGGGTCTCCATTATTTTTCTGTCCATCAGTCTTTGCTTCATATAACCCATACATAAGTACCTCGGTGGACAGTGACCCTAGGCTACACAACCATATTCCGTTTATGGGTTCAAGTTCACAAATGTTGCCTCCCTCTCTTGCACCATCTACATATACGAACTCATCCCCTCTTAAATCATTTCCAACTCAATTAAGTGCCAAATTTCTTGGTTCTGATCAATCTCACAACTAA 1065 0.4282 MRANYEMSTKIMSNPREEAFKAKQEGDISDEKFVKPSYSRQWSGFRNPRIVRVSRSFGGKDRHSKVSTIKGLRDRRIRLSVPTAIQLYDLQDRLGLGQPSKVIDWLLEATKHDIDKLPPLQFPQGFGEFHPPQSLVLPYESSASQFSLTPSFIDAALALRVGDNQGSNAKSKYWDMNFLSRTKLTDEDRRGFISEKGKCIKSTEDHENQDGCGYGNRISAQKSFPITSESPLLGLLNNAVPYSSYHSDPSSLCLSHFGSHGTLSSQLETKNGSTAVPSGSPLFFCPSVFASYNPYISTSVDSDPRLHNHIPFMGSSSQMLPPSLAPSTYTNSSPLKSFPTQLSAKFLGSDQSHN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00400 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 51 275 IPR005333 GO:0003700
Pte3g00400 354 ProSiteProfiles TCP domain profile. 59 117 IPR017887 -
Pte3g00400 354 Pfam TCP family transcription factor 59 163 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00400 Pte-Chr3 3312300 3314315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00400 17 228 TCP Transcription Factor Family AT5G60970 50.870 8.93e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte3g00400 TCP 5.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00400 - - qsu:112017684 339.732