Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00399 ATGGAATGTAACAAAGCTCAACCAGAGGGATCCTACGACCGGATCATATTTCCTGAAAATCCATCAAGAGATCCAGTTATGAAATCGTTTGTCTTTCCATATGTGGGACGACACTCACTTGATTTTAGGGATGTGGTGAAGGACTCTATTTATAGAGAGAGTAGAGGACTACCTGTTAAAACAATCAAAGAGGAAGCCGCCGGTGCCACGATAAAGCATAAAGACACTCCTTGGCATTTGCAGCTGTCCAAGTCCGTTAATGAATCCTATGGAGCTGATGTTGAAGGGAAGCCAATTCGACCAGTTGATCTGAAGGAGTCCCTCAGAGTTCTTACTAAGCTCAGAGAGATACCTTGGTATGGTAATGAAGCAAGAGAACTTGCGAGATCATCTTATGATGTAAAAGATGGACCATGGCATTCACTTCCAAATGTTGCACCAAGGTTTTCTCATGATGACAGAGATATAAGACGTTTCTCTTTTGAATCTCAGGATACTATCAAATCCACTCCAAAGCTAAAAGAGCTTCCCAGACTTTCATTGGACAGCAGAGGAGGTTCCATGCGAACTTCCAGCTCTGATTCAGAGATATCTCAGCTCCCAAAGAATTTTCAAAATGGTGGCAACTCAAATGATAAAATTTCTAATGTGTCACAGTTCAGTGGAGCTCAGAAGCGACCTCCTGGCGTGGTAGCAAAGCTAATGGGCTTGGAAGCATTGCCAGATTCCTCCGTGTCTGCAAATAATGAGGCTCGTTCTGTGGAGTCTTCCTTAGTGGGAGCTCAAAATTCATTCTCTAGATCACGTGGAACAAATGATTTAAACATAGGGAGCAGAAATTCCAATCCATCAAAGTTCTCTATGAAAGATGCTACTTCTCCAAGGTGGAAGAGTTCTGATTTTGTCATGAGACCAGTTTCAAGTTCAAGGTTTCCCATTGAACCAGCACCTTGGAAACAGCAACCTGGATATAGAAGGTCTCAAAAGGCAAGTTTTCGGACAGTAAAACAACCAACTAGGACACCTGATTCCTTTCCTTCTATTTATCGTGAAATAGAGAAGAGACTGAATGATATTGAGTTTAAACAATCTGGAAGAGATCTCAGAGCTCTTAAACAGATATTGGAAGCAATGCAACCCAAATGGCTGTTAGATACCACAAAGGAAGAGCAGGGTTCAAATTTTGCAAGTGAGAAAACTTTTGAACCGTGCAGAAGTTCTAATCAGAGTCTGAAGCCAGTGAGGCAACAAAAGTCACATATCAACCAGAGTATTAGTAGAAGAGTTGGAGGGTCTGACACGACCAGGGCGCTTGAATCCCCAATTGTGATTATGAAACCAGCAAAACGTGTTGACAAAGCTAGAATTTCAGCTTCCGCTGCTATTGCAGTGGATGATCTTTCAAGTCCTAATAAGATCCAAAGTGGTGGATATCAACATAATAAGAAGGCTTCAGCTAAGTCACGGGTAACAAGAGATCAATCTCCTCAAAAAGACTGCAGGGATGCGGCTGCTGGCACCAATGATAAAAAAACAAGTACGAGGAATGTAAGGGCAATACAGTTTCAGTCAAAGTCGTCCCAACTTTCTAGAGAAAATAACCACTTTACAGTTAAGAATTCAGGGTCAGTGAGCCCAAGGCTGCAACGGAAAAAGCTTGACTTGGAGAAGCGTTATCGACCTCCTACCCCTCCATCTGATTCAAGCAAACCCAGAAGAGTATCTGATAAGCAGGCAAGAGAATCAGCTTCACCAGGTGGTAAGGGGAGACCCAAATACCAGAACATGCAGTGTAGTGATGACCAATTGAGTGAAATTAGTAGCGACTCTATAAGTTTGAGCTGCCATGGAGACGATGCTTCTCTGCTTCCAGATCATAATGCATTGTCGGACTCAAATTTGGACGAAGAAATCACCAGCAAATTACAATCTTCAAAAATAAATGGCAGTCAGAGTCAATCCCTCGAAACTAAATGCTCGGTTTCTGGCTCAATGCAGAAGAACTCAACTCAAAAGTTTGACGGAGATGGGTCAGTCGCAGAACTTGCTACCAATACCCCAGAACAGCCCAGCCCCGTATCTGTTCTTGATGCATCAATATATAGAGATGACGCGCCATCATCCGCAAAGCATATATCACGCGATCCTGAAGCTGATGCCAATTTGCAATCTAAAGACACTCAAGATGAAAGTCATTGGAACACTAAGGATAAGTTATCTTCTAACGGCATAGGATCTGGTCTGACACTAGAGGTCAACAGGAAGAAGTTACAGAAAATAGAAAACCTGGTACAGAAGCTGAGACAGCTAAATTCCAGTCATGATGAAGCTAGGACAGATTACATTGCTTCTCTTTGTGAGAATACAAATCCTGATCGTAGATACGTATCGGAGATACTGTTGGCTTCAGGTCTACTTCTCAGGGATCTGGGGTCCGAACTGATGACATTTCAACTCCACCATTCTGGCCACCCCATTAACCCTGAACTATTCTTTGTTTTAGAGCAGACAAAAGCGAGCTGCACCCTATTTCCAAAAGAAGAACATACCTGTGGGTTGTTTTCTCATTCAAAGTCAAACCCTGCAAAACACCACAGAAAACTTGTGTTTGACACTGTCAATGAGATTCTCGGTGTTAAGTTGTCGACTTTGGCCCCATGTTCCGACCCATGGTTGAAGCCTATCAAACTTGCGAGGAAGACCCTTACTGCTCAAAAGCTCCTTAAAGAGCTGTGTTCAGAGATAGAACTCATCCAATCTATGCAATCAGTGTGTGCTCTGGGAGGTGACGATGATAGCTTGAGAAGTGTTCTATGGGAAGATGTAATGCATCGGTCAGATAGTTGGATTGAGTTCCAAAATGAAATGCCTGTAGTAGTCCTGGATGTCGAGAGACTTATTTTCAAGGATTTAGTAGATGAGATTGTCATTGGCGAGGCACTTGGTTTGCTAATCAAGCCAAGCAGACGCAATCAGCTGTTTGCACAGTAG 2991 0.4286 MECNKAQPEGSYDRIIFPENPSRDPVMKSFVFPYVGRHSLDFRDVVKDSIYRESRGLPVKTIKEEAAGATIKHKDTPWHLQLSKSVNESYGADVEGKPIRPVDLKESLRVLTKLREIPWYGNEARELARSSYDVKDGPWHSLPNVAPRFSHDDRDIRRFSFESQDTIKSTPKLKELPRLSLDSRGGSMRTSSSDSEISQLPKNFQNGGNSNDKISNVSQFSGAQKRPPGVVAKLMGLEALPDSSVSANNEARSVESSLVGAQNSFSRSRGTNDLNIGSRNSNPSKFSMKDATSPRWKSSDFVMRPVSSSRFPIEPAPWKQQPGYRRSQKASFRTVKQPTRTPDSFPSIYREIEKRLNDIEFKQSGRDLRALKQILEAMQPKWLLDTTKEEQGSNFASEKTFEPCRSSNQSLKPVRQQKSHINQSISRRVGGSDTTRALESPIVIMKPAKRVDKARISASAAIAVDDLSSPNKIQSGGYQHNKKASAKSRVTRDQSPQKDCRDAAAGTNDKKTSTRNVRAIQFQSKSSQLSRENNHFTVKNSGSVSPRLQRKKLDLEKRYRPPTPPSDSSKPRRVSDKQARESASPGGKGRPKYQNMQCSDDQLSEISSDSISLSCHGDDASLLPDHNALSDSNLDEEITSKLQSSKINGSQSQSLETKCSVSGSMQKNSTQKFDGDGSVAELATNTPEQPSPVSVLDASIYRDDAPSSAKHISRDPEADANLQSKDTQDESHWNTKDKLSSNGIGSGLTLEVNRKKLQKIENLVQKLRQLNSSHDEARTDYIASLCENTNPDRRYVSEILLASGLLLRDLGSELMTFQLHHSGHPINPELFFVLEQTKASCTLFPKEEHTCGLFSHSKSNPAKHHRKLVFDTVNEILGVKLSTLAPCSDPWLKPIKLARKTLTAQKLLKELCSEIELIQSMQSVCALGGDDDSLRSVLWEDVMHRSDSWIEFQNEMPVVVLDVERLIFKDLVDEIVIGEALGLLIKPSRRNQLFAQ* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00399 996 PANTHER LONGIFOLIA PROTEIN 2 994 IPR033334 GO:0051513
Pte3g00399 996 MobiDBLite consensus disorder prediction 468 484 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 595 611 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 642 675 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 707 736 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 509 547 - -
Pte3g00399 996 Pfam DUF761-associated sequence motif 222 246 IPR032795 -
Pte3g00399 996 MobiDBLite consensus disorder prediction 312 345 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 262 292 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 486 508 - -
Pte3g00399 996 Pfam Domain of unknown function (DUF4378) 793 974 IPR025486 -
Pte3g00399 996 MobiDBLite consensus disorder prediction 324 344 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 642 740 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 170 213 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 549 563 - -
Pte3g00399 996 Coils Coil 750 780 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 393 433 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 468 611 - -
Pte3g00399 996 MobiDBLite consensus disorder prediction 184 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00399 Pte-Chr3 3303693 3308879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00399 32 995 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.411 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00399 - - qsa:O6P43_022922 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00399 3 3303693 3308879 Pte3g00399 3 3303693 3308879 RCT