Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00398 ATGCTGGTAATGCAGCATGTTCCTGTTATGATGCTAGTTTTGTTGTGTCCTAAGCAAATATCCGTTAATGTGATGATTGAATACTTCATGATGAAATTGACTTCATATGTAGAATTTAAAATCGAGATGTGTCTTTCTTGGTTTCACCTTATTGTTCATGCAGATGCGTATCCTGCTCATAATCCACTTGGGAATATAACTATCAAATGGGATCTTTTGAGCTGGACTCCAGATGGATATGTTGCTGTTGTTACAATGTACAACTATCAACGGCATCGCTCCATTCAAGCCCCTGGTTGGAAATTAAGTTGGACATGGGCCAAAAAGGAAATTATTTGGAGCATGCTGGGAGGCCAAACCACAGAGCAAGGAGACTGTTCAAGATTCCTCGGAAACATACCACATTGTTGTCAGAAAAGGCCAACAGTGGTGGATTTGTCGCCAGGAACTCCATACAATCAGCAGATTGCAAATTGTTGCAAAGGGGGCAAATTAAAGCCTTACCAAGCAAGTTCATTCCAGTTATCCGTAGGTTCTGCCGGGACAACTAATACCACTGTCAAATTGCCCCAGAATTTCAGTCTTAAGGCACCTGGTCCTAAATACACTTGTGGTCCTGCAAAGATTGTCCGACCAACTCGATTTCTTTCAGCAGATAAAAGAAGAGTCACTCAAGCATTTAGTAAGTCAAATGCAGAACTTGACTCTGAACTTCATAAATATCACTGA 729 0.4102 MLVMQHVPVMMLVLLCPKQISVNVMIEYFMMKLTSYVEFKIEMCLSWFHLIVHADAYPAHNPLGNITIKWDLLSWTPDGYVAVVTMYNYQRHRSIQAPGWKLSWTWAKKEIIWSMLGGQTTEQGDCSRFLGNIPHCCQKRPTVVDLSPGTPYNQQIANCCKGGKLKPYQASSFQLSVGSAGTTNTTVKLPQNFSLKAPGPKYTCGPAKIVRPTRFLSADKRRVTQAFSKSNAELDSELHKYH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00398 242 Pfam COBRA-like protein 80 229 IPR006918 GO:0010215|GO:0016020
Pte3g00398 242 PANTHER PROTEIN COBRA 46 231 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00398 Pte-Chr3 3299022 3300706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00398 55 227 COBRA Gene Family AT3G29810 66.480 2.49e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00398 - - pvy:116109720 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00398 3 3299022 3300706 Pte3g00398 3 3299022 3300706 RCT