Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00397 ATGGATTTCAATAGAAGACAATGCGAACAGCAGCAATGCTACCTTCATAAGTTTATCTTCCTTGTTTTGGCTGCCATGTTTGTGATCATGACATCTCATTCTGAGGCCTATGATCCTTTGGATCCAACTGGGAATATCACAGTCAGATGGGATATTATGTCTTGGACGGCGGATGGTTATACGGCTTCAGTGGCAATCAACAATTTTCAGATGTACAGAAGCATAGGGAAGCCTGGGTGGACTCTAGGATGGACTTGGGCAAAGAAAGAAATCATATGGGGCATGGTGGGAGCTCAAGCCACAGAACAAGGAGACTGCTCTAAATTCAAGTTAAACATTCCTCACTGCTGCAAGAGGAAACCTGCTGTGGTTGACTTGCTTCCAGCTGCTCCTTACAATCTACAATATGCGAATTGCTGCAGGGGAGGAATATTAACATCTTGGGGTATGGATCCCACAGCTTCAATGTCAGCCTTTCAGTTGACTGTTGGCCTTTCTGGTACCTCCAATAAGACTGTCAAACTGCCCAAGAATTTCAATTTGCTTGGACCAGGACCAGGATATTCCTGTGGCCCTGCTAAGATTGTACCATCCACTATGTTTCTCTCAGCAGATGGCAGGCGCAAGAGTCAGGCATTGATGACATGGAACGTGACATGCACTTACTCACAGTTCCTTGCCTCAAAGAACCCCAGATGTTGTGTTTCTCTCTCAACATTCTACAGTGATATTGTCACTCCCTGCCCATCTTGTGCTTGTGGTTGCCAAAACAACAATAGCTGCATACCGCACGACTTGATGCTGCTTAAGCAACCTGGAATTGACGCTTCAAAGAAGGATAACTCGCCATTGCTACAATGCACTCGCCATATGTGTCCCATCAGGGTTCACTGGCACGTTAAAGAGAACTATAAGGACTATTGGCGCGCAAAGATCTCCATCACCAATTTCAACCATAGACTAAACCACTCACAGTGGACACTTGTAGCACAGCATCCTAATCTCAACAATGTCACGAGAGTTTATAGCTTTGAGTACAAGCCCCTTGTTCCCTATGAATCTATAAACGATACAGGCATGTTCTATGGTTTGAAATATTACAATGACTTCATTATGGAAGCTGGACCTTTCGGTAATGTCCAGTCTGAAGTTCTTATGAAAAAGGACATGAACACATTCACATTCAAGCAAGGATGGGCATTTCCTAGGAAAGTCTACTTCAACGGGGACGAATGCATGCTGCCTCCACCAGACACTTACCCTTTTCTGCCAAATTCTGCTTACGCGCATGGCACTTCAGTTCCATATATTCTTATGCTATTTTTCTTTTGGCGATTCTTTGCTTACTCCTGA 1353 0.4435 MDFNRRQCEQQQCYLHKFIFLVLAAMFVIMTSHSEAYDPLDPTGNITVRWDIMSWTADGYTASVAINNFQMYRSIGKPGWTLGWTWAKKEIIWGMVGAQATEQGDCSKFKLNIPHCCKRKPAVVDLLPAAPYNLQYANCCRGGILTSWGMDPTASMSAFQLTVGLSGTSNKTVKLPKNFNLLGPGPGYSCGPAKIVPSTMFLSADGRRKSQALMTWNVTCTYSQFLASKNPRCCVSLSTFYSDIVTPCPSCACGCQNNNSCIPHDLMLLKQPGIDASKKDNSPLLQCTRHMCPIRVHWHVKENYKDYWRAKISITNFNHRLNHSQWTLVAQHPNLNNVTRVYSFEYKPLVPYESINDTGMFYGLKYYNDFIMEAGPFGNVQSEVLMKKDMNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNSAYAHGTSVPYILMLFFFWRFFAYS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00397 450 PIRSF COBRA 10 449 IPR006918 GO:0010215|GO:0016020
Pte3g00397 450 PANTHER PROTEIN COBRA 24 439 IPR006918 GO:0010215|GO:0016020
Pte3g00397 450 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00397 Pte-Chr3 3295239 3297909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00397 8 447 COBRA Gene Family AT3G02210 58.389 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00397 - - qsu:112009789 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00397 3 3295239 3297909 Pte3g00397 3 3295239 3297909 RCT