Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00386 ATGGGGTGCTCGTTCTCCGGGTTGAATGCGTTTTACGACGTCGTCAATGGGGCTGGAGAAGTCTGGATCAATGAGAACCGATTCCGCATTGTGAAGCAGCTCGGAGAAGGTGGATTTGCCTATATCTATTTGGTTAAGGAGGTGGTCGCTGAAAATTCCTCTGCCACTGGTGGGGGTCTCGCCATGAAACTCAAGGACGCTTCTCTTCTTTCTGAAGATGGTACTTATGCCATGAAGAAGGTTCTCATTCAGAATGATGAGCAGTTACTGCTGGTGAAAGAGGAGATCCGTGTTTCTTCTCTGTTCAGTCATCCCAATTTGCTTCCTCTTCTTGATCATGCTATCATTTCTGTCAAGCCTACCAAGGAACGCGCTTGGAAACATGAAGCATATTTACTATTTCCTGTTCATTTGGATGGAACATTGCTGGACAATACCAATGCTATGAAAGCCAGAAATGAGTTCTTCGCAACTTCAGATGTTCTTCAAATATTCCGGCAGCTGTGTGCAGGAGTGCAGCATATGCATAACTTCGATCCTCCATATGCGCACAATGATGTGAAACCTGGTAATGTTCTCATTGGACACAGGAAAGGAAAAGCACCTCTTTCCATATTGATGGATTTTGGAAGTGCTCGACCTGGTAGGAGGCAAATTCGCTCTAGTTCGGAGGCACTGCAACTGCAGGAGTGGGCTTCTGAACACTGCTCTGCTCCTTTCAGAGCCCCTGAGCTATGGGATTGCCCAAGCCATGCCGATATAGATGAGAGAACTGATATTTGGTCATTGGGATGCACATTATATGGAATAATGTATGGCTCGTCTCCATTTGAATATGCACTTGGAGAGTCAGAAGGAAGCCTGGAATTGGCCATTGTAAATGCCCAGATCAAGTGGCCACCTAAGTCTGCATACCCAGATGCTCTTCATCAGTTTGTCACATGGATGCTTCAGCCCCAGGTTGCAGTCCGCCCAAGGATAGATGACATTATAATCCATGTCGACAAATTGATCGCAAAGTTCTCTGGTTGA 1032 0.4612 MGCSFSGLNAFYDVVNGAGEVWINENRFRIVKQLGEGGFAYIYLVKEVVAENSSATGGGLAMKLKDASLLSEDGTYAMKKVLIQNDEQLLLVKEEIRVSSLFSHPNLLPLLDHAIISVKPTKERAWKHEAYLLFPVHLDGTLLDNTNAMKARNEFFATSDVLQIFRQLCAGVQHMHNFDPPYAHNDVKPGNVLIGHRKGKAPLSILMDFGSARPGRRQIRSSSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYGIMYGSSPFEYALGESEGSLELAIVNAQIKWPPKSAYPDALHQFVTWMLQPQVAVRPRIDDIIIHVDKLIAKFSG* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00386 343 CDD STKc_16 27 339 - -
Pte3g00386 343 ProSitePatterns Protein kinases ATP-binding region signature. 34 63 IPR017441 GO:0005524
Pte3g00386 343 SUPERFAMILY Protein kinase-like (PK-like) 20 333 IPR011009 -
Pte3g00386 343 SMART serkin_6 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00386 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 341 - -
Pte3g00386 343 ProSiteProfiles Protein kinase domain profile. 28 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00386 343 Pfam Protein kinase domain 70 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00386 343 Gene3D Transferase(Phosphotransferase) domain 1 16 342 - -
Pte3g00386 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00386 Pte-Chr3 3182265 3186334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00386 33 298 EF-hand Containing Proteins AT4G04710 26.296 3.79e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pte3g00386 Pkinase 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00386 K08856 - csin:114307002 594.734