Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00324 ATGGATCAGAGTTCGAAAATGGACAAAGATTCACATCAAAAGCGTTTGACAAATTGTGTTTATTTCTTGGCATCTCCTCTCACTTGCAAAAAGGGGGTCGAGTGTGAGTATCGGCACAGCGAGGTGGCAAGGCTTAACCCCAGGGATTGCTGGTACTGGTTAGCTGGAAGCTGTCTGAATCCCACTTGTGCTTTTAGGCACCCTCCATTGGAGGGGCACGCTGCTCTACATGCTGAAGCTACTGAACAGCCTTTTCATTCCAGCAAGTCAAAAGTACCCTGTTACTTTTACTTTAATGGGTATTGTAATAAAGGTAACAGATGTTCATTTTTGCATGGACCTGATAGTAGCTCTTCTGCTGGAAGCCCTATAAAGCCTATCAGTTCAAGCACCGAGGCCCTTATTGTTGAAAATAACGTTTCCTTGGAAAAGAACACGACTTCCGTACCAGAACCAACTGAAATGAAGAGCTTTCCATCTGGAACTGTGCAAAAGGTTGATTATGAGGTTAAGCCTGAAAATGATATTCAGTGTTTAACCATGCATGAAAGCAAAGACAAGTCTATTAAGTCAGGCTCCATATGTCCTGAAGAAGATGTTGTTCATGATGTGCCTCATCTGTTTGCTCGGCAGAATAGTGAAGAACATCTAAATAACATGGAGTCAGAAGAACAGTGGGAATCTTTACCAGGCTTTGATGTTCTTGTAGATGATAAATCAGAGGAAGCGGATTATGATGAATGTTTTGAAGACGCCCTATCAAGCCAATCCAGGAAGATCCATGAATGTTCTCTGGATTATGAGAATGGGGAAATATTCGACTATGATCAGATATGCCCAGATACAGACATTGTTTCTGAAAGAAATGTCTATGATCGTTACAGTTGTCTAGATAGTGATCATAATGTTTATGATGTGGGAGAAGTTCCCGCTTGCTTCAGGGAGAATACATGTGATCCTCTATTTTTCAGGAAGAGGAAGTGGATGCAGGATTACAGAAGGACTTCAGATTTGCGTGACCATATGAAAAAGCGAAGTGAAATTGCCAGACATCCAATCCTCGGATCGTATAGAAGGTGTACTTCATATCCTTGGACAGTCAGAAATAAGGGAAGGTATGAATCAAATAACATGGTTCGACAGCTAAATAGGAAATTGGCATCAGAATTGGAAGTGAGCACTGTACTATCCATAGGATTGGATGGAATTCAATCTCAACCATATAGGTTGTCCCAGGAAATCAAGAAGGAAAGGGAAGCAAAATGGCAGTTTTTTCCATCCAGAGTGTCCAGGAAACAACTTTGGAGGGAAAGGAAATCCCATCATGGATTCACTGCCTTTAGGGGATCAAAGGCACTTAACCAGATAAAAGATGGTAAAAGGAAGTCCGTAGAATATGGTCACTGCAAGGTAACATTAGCTGACTTCCAGGGTCCCAAGCCCCTGAGTGAACTTCTAGAGGAGAAGAGGAGGCTGGATGGTGTGCGAGACTGCAACAGCAACACTTAA 1509 0.4228 MDQSSKMDKDSHQKRLTNCVYFLASPLTCKKGVECEYRHSEVARLNPRDCWYWLAGSCLNPTCAFRHPPLEGHAALHAEATEQPFHSSKSKVPCYFYFNGYCNKGNRCSFLHGPDSSSSAGSPIKPISSSTEALIVENNVSLEKNTTSVPEPTEMKSFPSGTVQKVDYEVKPENDIQCLTMHESKDKSIKSGSICPEEDVVHDVPHLFARQNSEEHLNNMESEEQWESLPGFDVLVDDKSEEADYDECFEDALSSQSRKIHECSLDYENGEIFDYDQICPDTDIVSERNVYDRYSCLDSDHNVYDVGEVPACFRENTCDPLFFRKRKWMQDYRRTSDLRDHMKKRSEIARHPILGSYRRCTSYPWTVRNKGRYESNNMVRQLNRKLASELEVSTVLSIGLDGIQSQPYRLSQEIKKEREAKWQFFPSRVSRKQLWRERKSHHGFTAFRGSKALNQIKDGKRKSVEYGHCKVTLADFQGPKPLSELLEEKRRLDGVRDCNSNT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00324 502 ProSiteProfiles Zinc finger C3H1-type profile. 13 42 IPR000571 GO:0046872
Pte3g00324 502 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 91 114 IPR000571 GO:0046872
Pte3g00324 502 Gene3D - 2 71 - -
Pte3g00324 502 Gene3D - 77 191 - -
Pte3g00324 502 ProSiteProfiles Zinc finger C3H1-type profile. 44 70 IPR000571 GO:0046872
Pte3g00324 502 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 7 494 - -
Pte3g00324 502 Pfam Zinc-finger containing family 14 71 IPR041686 -
Pte3g00324 502 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Pte3g00324 502 FunFam Zinc finger CCCH domain-containing protein 17 7 70 - -
Pte3g00324 502 SMART c3hfinal6 46 69 IPR000571 GO:0046872
Pte3g00324 502 SMART c3hfinal6 14 41 IPR000571 GO:0046872
Pte3g00324 502 SMART c3hfinal6 89 114 IPR000571 GO:0046872
Pte3g00324 502 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00324 Pte-Chr3 2702951 2705542 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte3g00324 zf-CCCH_3 1.4e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00324 - - qsa:O6P43_023067 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00324 3 2702951 2705542 Pte3g00324 3 2702951 2705542 RCT