Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00318 ATGGATGGGAACAAGGACGATGCTTTGAAATGCTTGAAGATTGGGAAGGATGCACTTGAAGTTGGTGATCGACCTCGAGCCCTCAAGTTCATCACCAAAGCACGTCGTCTCGATTCGACGTTATCTGTTGACAATCTTATTTCCACTATGCAGAGTGAACCGGATAATGGATCGAATCAGGATGTAAATACTGATGTTCCGTCGGCTGCCGATGCCAACTCTGCCAAGGAGCCTCCCGTGTCCTCTTCAGCTAAGCCATCTGAAAAACCTTCCCTTCGTCGTAGGGTTTCATCAAACGGGCCCGCTTCAGTTTCATCATCTACTGCAACCTTCACGGAGGAACAGGTTACTATTATGAGGGAGATAAAGACGAAGAAAGGTTATTATGAGATTTTGGGATTGGAGAAGAGTTGTACTGTTGAGGATGTACGAAAAGCGTACAGGAAACTGTCTTTGAAGGTTCATCCTGACAAAAACACTGCTCCTGGTGCCGAAGAAGCTTTTAAGGCAGTGTCGAAGGCGTTTCAATGTCTTAGCAATGAAGAGAGTAGGAAAAAGTACGACCTTACTGGATCGGATGAACCTGTGTATGAGAGACGTGCTACAAGGCATGGAGCATATGGATTCAATGGATACACTGAGGCTGAATTTGACGCTGATGAAATATTTAGAAATTTCTTCTTTGGTGGGATGGCTACAATGCAAGCCAATTTTGCTGGTTTCAATTTTGGGCCAGGAATGGCACGTAGGACAACTGATAATGGCTCAAGTGGATTTAATGTGTGA 786 0.4478 MDGNKDDALKCLKIGKDALEVGDRPRALKFITKARRLDSTLSVDNLISTMQSEPDNGSNQDVNTDVPSAADANSAKEPPVSSSAKPSEKPSLRRRVSSNGPASVSSSTATFTEEQVTIMREIKTKKGYYEILGLEKSCTVEDVRKAYRKLSLKVHPDKNTAPGAEEAFKAVSKAFQCLSNEESRKKYDLTGSDEPVYERRATRHGAYGFNGYTEAEFDADEIFRNFFFGGMATMQANFAGFNFGPGMARRTTDNGSSGFNV* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00318 261 ProSiteProfiles dnaJ domain profile. 127 191 IPR001623 -
Pte3g00318 261 CDD DnaJ 128 180 IPR001623 -
Pte3g00318 261 PRINTS DnaJ domain signature 147 162 IPR001623 -
Pte3g00318 261 PRINTS DnaJ domain signature 163 183 IPR001623 -
Pte3g00318 261 PRINTS DnaJ domain signature 129 147 IPR001623 -
Pte3g00318 261 Gene3D DnaJ domain 123 239 IPR036869 -
Pte3g00318 261 ProSitePatterns Nt-dnaJ domain signature. 168 187 IPR018253 -
Pte3g00318 261 SMART dnaj_3 126 183 IPR001623 -
Pte3g00318 261 MobiDBLite consensus disorder prediction 46 110 - -
Pte3g00318 261 PANTHER AT29763P-RELATED 1 238 - -
Pte3g00318 261 FunFam Chaperone protein dnaJ 49 123 239 - -
Pte3g00318 261 SUPERFAMILY Chaperone J-domain 123 232 IPR036869 -
Pte3g00318 261 Pfam DnaJ domain 128 188 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00318 Pte-Chr3 2589740 2595409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00318 122 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.437 2.69e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00318 K09518 - qsa:O6P43_023079 351.673