Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00306 ATGGGGTCAGAAGCTCCCGCTACGATTGTAGAAAAGGCTTCAGGAAATAAAAGGTCATACTCTAACAGAAAGATTCGAGGCAAAGTCCCTAAACGTATTCATAAGGCCGAAAGGGAGAAATTGAAGCGTGAAGAATTGAATGACCTTTTTCTTAAGCTGGCCAATGCTCTTGAAATGACGGAGCATAACAATGGGAAGGCATCGGTATTGTGTGAAACTATTCGACTCCTGAAGGACTTGCTTGGTCAGATTGAGTGTCTCAAGAAGGAGCAGGCATCTCTTCTGTCTGAATCTCATTATGTGACATTAGAGAAGGATGAACTAAGAGAAGAAAAATCTGCATTAGAAACTGAAGTCGAGAAGCTAAAGGAAGAGGTGGAATCAAAGGTCACAAAATGTAAGCCAGACTTTAATGCCCCTCTGGAATTCAAGCAGCCGGAAATAATGCCCAAGTTTGCAGGAGATGGTTTCAGTTTGCCTACTGCAGAACCTACATTGCAGCAGGGAGCTGCAGTGTTTGTCGTGCCTGTCCATCGCGAGCTTCAAGGTTTTCAAGTACCAACCGGTGCAGAACTTGCCTCAAGACCAAGTAAACCGCATGCGAGGTATCCCACTCCGGCCGATTCATGGCCATCCCAGCTGCTTGGCAAGCCAACCAGCTCAAGCTAA 669 0.4589 MGSEAPATIVEKASGNKRSYSNRKIRGKVPKRIHKAEREKLKREELNDLFLKLANALEMTEHNNGKASVLCETIRLLKDLLGQIECLKKEQASLLSESHYVTLEKDELREEKSALETEVEKLKEEVESKVTKCKPDFNAPLEFKQPEIMPKFAGDGFSLPTAEPTLQQGAAVFVVPVHRELQGFQVPTGAELASRPSKPHARYPTPADSWPSQLLGKPTSSS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00306 222 Coils Coil 77 97 - -
Pte3g00306 222 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 80 IPR011598 GO:0046983
Pte3g00306 222 PANTHER TRANSCRIPTION FACTOR BHLH47 2 217 - -
Pte3g00306 222 MobiDBLite consensus disorder prediction 187 222 - -
Pte3g00306 222 Coils Coil 105 132 - -
Pte3g00306 222 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 94 IPR036638 GO:0046983
Pte3g00306 222 Gene3D - 28 102 IPR036638 GO:0046983
Pte3g00306 222 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00306 Pte-Chr3 2512692 2515914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00306 1 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 43.933 1.02e-56 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00306 - - cave:132176514 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00306 3 2512692 2515914 Pte3g00306 3 2512692 2515914 RCT