Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00304 ATGGATTCTCTCAACCTCTTCAGTGGTTATGGCAAAGTAGAAGACCAGAGCCACCTTGAAGATCAGGCTCCTAATCGAAGTACTGTCTATCAGAATCAGCAGAAAAAGCCCCTCAAAATCGCTGCTTCAGTTTTTGGTATCATTCTCCTAACTCTGACGGTTACCTTATTGATCCAAGCAGTCATACACAAGTCTAATACTGGAGAACTGGAACACGATGAAAACCCATCATCACTCTCATCCATCAAAGTCGTCTGCAACTTTACTCGGTTTCCTGACTCTTGCTTCACAAGCATAGCATCCACCCCCCTCAAAGTCAAATTCAACACCATCAACTATTCAGATCCAGTGGCCATTTTCAACCTATCCCTTCATGTCTCCATCAACGAGCTCTCTAGGTTGTCGCCTTTCTTGAAAACGCTGGCTTCCAAGTCAAACGGAGCTACTGCGGTGCGCGATTGTGAGTCCCAAATCGAAGATTCACTGAATCAACTCAATGACTCGGTTTCAGCCCTCTTAGAGGTGGGTCCCGCCGGCGAGGGGTTGACGGACAGGAAGATCAACGACATTCAGACATGGATTAGCGCCGCCCTGACATACGAGGAAACTTGCCTGGATGGGTTGGAAGAGGCGGATTCAAGTGTTCTAGGCGAGGTGAGGATGAAGATGCAAAAATCAAAGGAATACACTAGTAACAGTCTGGCAATCGTTGCTAACATGAACACCATACTGAACATGTTTCGAATGTCCAAACACTGA 759 0.4651 MDSLNLFSGYGKVEDQSHLEDQAPNRSTVYQNQQKKPLKIAASVFGIILLTLTVTLLIQAVIHKSNTGELEHDENPSSLSSIKVVCNFTRFPDSCFTSIASTPLKVKFNTINYSDPVAIFNLSLHVSINELSRLSPFLKTLASKSNGATAVRDCESQIEDSLNQLNDSVSALLEVGPAGEGLTDRKINDIQTWISAALTYEETCLDGLEEADSSVLGEVRMKMQKSKEYTSNSLAIVANMNTILNMFRMSKH* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00304 252 CDD PMEI-like_3 85 242 - -
Pte3g00304 252 FunFam Pectinesterase 78 241 - -
Pte3g00304 252 Pfam Plant invertase/pectin methylesterase inhibitor 81 236 IPR006501 GO:0004857
Pte3g00304 252 NCBIfam pectinesterase inhibitor domain 51 239 IPR006501 GO:0004857
Pte3g00304 252 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 82 240 IPR035513 -
Pte3g00304 252 Gene3D Invertase/pectin methylesterase inhibitor family protein 78 241 IPR035513 -
Pte3g00304 252 SMART PMEI_2 77 236 IPR006501 GO:0004857
Pte3g00304 252 PANTHER PECTINESTERASE 54 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00304 Pte-Chr3 2507365 2508910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00304 1 252 Carbohydrate Esterase AT1G53840 32.721 1.22e-30 117