Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00303 ATGTCCAACAAAACAAGCTTTGGAGCTTCGAAATTCAATGAGGATGAGATGAATAATCTTGTGTCAAGGCTACAAGAATTGCTGCCCCAACTAAATCGAAGGCCTAACTCAAGGATATCGGCATCACAAGTTTTGAAAGAGACTTGCGCTCACATCAAGAGGTTACATAAAGAGGTGAACAGTCGGAGTGAAAGACTCTCTCAACTAATGGATTCTTTGGAGATAACAGACACAGTCATAGAAGAAACTGTTAGAAGAATTCTGCAGCAGTAG 273 0.4066 MSNKTSFGASKFNEDEMNNLVSRLQELLPQLNRRPNSRISASQVLKETCAHIKRLHKEVNSRSERLSQLMDSLEITDTVIEETVRRILQQ* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00303 90 Pfam Helix-loop-helix DNA-binding domain 15 55 IPR011598 GO:0046983
Pte3g00303 90 PANTHER DNA BINDING PROTEIN 7 90 IPR044172 -
Pte3g00303 90 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 73 IPR036638 GO:0046983
Pte3g00303 90 Coils Coil 14 34 - -
Pte3g00303 90 Gene3D - 13 83 IPR036638 GO:0046983
Pte3g00303 90 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 55 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00303 Pte-Chr3 2505370 2506140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00303 8 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 47.059 2.67e-18 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte3g00303 HLH 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00303 - - qsa:O6P43_022826 96.6709