Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00300 ATGCTCGGTCCAAATGGAGCTGGCAAGACCTCGTTTATCAATATGATGATCGGTCTCACAAAACCATCTTCCGGCACAGCATATGTACAGGGTCTGGACATAAGGACTGATATGAATGGAATATACACAAGCATGGGCGTATGCCCCCAGCATGACTTGCTTTGGGAAACACTATCAGGAAGGGAGCACTTGCTCTTTTACGGCAGACTTAAAAACCTCAAAGGGTCTGCCCTGACAGAAGCAGTGGAAGAATCTCTCGTGAGTGTAAACTTATTCCATGGCGGGGTTGCTGACAAACAAGCTGGGAAGTACAGTGGAGGAATGAAAAGGAGGCTCAGTGTTGCAATTTCCTTGATTGGTGATCCCAAGGTTGTTTACATGGATGAGCCTAGTACAGGATTAGATCCAGCTTCAAGAAACAATTTGTGGAACGTAGTGAAGCATGCAAAGCAAGACCGTGCAATCATTCTTACAACACATTCTATGGAAGAAGCAGAGGTGTTATGTGATCGATTGGGGATCTTTGTAGATGGTAGCTTACAGTGTATAGGAAACCCAAAAGAGCTGAAAGCAAGATATGGTGGATCATACGTGTTTACACTGACAACATCAGCTGCTCATGAGAACGATGTGGAAAACCTGGTTAAGCAACTCTCGCCAAATGCTAACAGGATATACCACATATCTGGAACACAGAAGTTTGAGCTGCCAAAACACGAGGTCAGAATATCAGAAGTATTTAAGGCTGTTGAGAACGCAAAGAGCAAATTCCCTGTTTTTGCTTGGGGTGTAGCCGACACTACATTGGAGGATGTTTTCATCAAAGTAGCACGAGGGGCTCAAGCATTCAATGTCTTATCATGA 864 0.4433 MLGPNGAGKTSFINMMIGLTKPSSGTAYVQGLDIRTDMNGIYTSMGVCPQHDLLWETLSGREHLLFYGRLKNLKGSALTEAVEESLVSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKHAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKARYGGSYVFTLTTSAAHENDVENLVKQLSPNANRIYHISGTQKFELPKHEVRISEVFKAVENAKSKFPVFAWGVADTTLEDVFIKVARGAQAFNVLS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00300 287 ProSitePatterns ABC transporters family signature. 104 118 IPR017871 GO:0005524|GO:0016887
Pte3g00300 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 184 IPR027417 -
Pte3g00300 287 FunFam ABC transporter A family member 2 1 210 - -
Pte3g00300 287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 202 IPR003439 GO:0005524
Pte3g00300 287 Gene3D - 1 231 IPR027417 -
Pte3g00300 287 CDD ABC_subfamily_A 2 190 - -
Pte3g00300 287 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1 281 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pte3g00300 287 Pfam ABC transporter 1 131 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00300 Pte-Chr3 2480841 2482850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00300 1 224 Calmodulin-binding Proteins AT2G36910 24.370 7.49e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00300 - - jre:109004357 525.783