Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00297 ATGAATTTACAAAGCGGGTTTCCGCTTCTGTTGCAACAATTCACAGCGCTATTCAAGAAGAACTTCTTGCTTTCATGGCGGAACAAGAGAGCTTTTTTTCTTCAACTATTCTCTTCTTTCTTCTTTATGTTCCTCATATTTTTTATTGAAAAAGCAATTGATGCTCGATACTCCTCGTCCACTCTTTTCCAGAGTGTCACTGATCCTGAACCACTTGTCTCTCCTCCGATTCCGCCATGCGAGGATAAATTCTACGTTAAGCTTCCTTGCTATGACTTCGTTTGGAGCGGAAATGGCAGCTCTAAAGTTGATACAATTGTTGATAGGATCATGGTTAATAATCCTGGCAGGCCCATTCCTTCGAACAAGGTTTTGTCATTTAGAACCTCAACTGAAGTGGATGAATGGCTTTTTACTAATCCTATGCACTGTCCAGGGGCTCTGCATTTCATGGAAAGGAGCGCCTCAGTAATTAGCTACGGTATACAGACAAATTCAACTCCTCTTGCCAAGCGAGGGCAGTATGAAGATCCAGTATTCAAATTTCAAATTCCACTACAAGTAGCTGCGGAGCGTGAAATTGCAAGATCTCTAATTGGAGATCCAAACTTCAGCTGGATTGTCGAGTTGAAGGAATTTGCACACCCTGCCGTGGAAAAATTCTCTGCTGTAGGTACAATGGGTCCAACATTTTTCCTTGCGATTGCAATGTTTAATTTTGTCCTCCAGATCAGCTCTTTGGTCACAGAAAAAGAACTGAAACTTCGCCAGGCAATGACGTTGATGGGCCTTTTTGATTCTCCTTATTGGTTGTCATGGCTCTCTTGGGAGGGGATCATTACTCTACTATCGTCCCTTTTCCTTGTCCTCTTTGGAATGATGTTTCAGTTTGATTTCTTCTTGAACAACAATTTTGGAGTTGTTTTCTTTCTTTTCTTCCTTTTTGAACTTAATATGACTGGCTTCGGTTTCATGCTCTCTGCCTTCATCAGCAAGTCATCTTCGGCAACAACTCTTGGTTTCTTCATATTTATTATTGGGTTTTTGACTCAGCTAGTCACTATTTTTGGATTTCCCTACAGCAAAAGTTTCTCCAAGCCTTTGCAGATAATCTGGTCCTTCTTTCCACCAAATCTTCTTGCTCAAGGTCTATCTCTTCTTTCTGGTGCAACTTCCACACCTCAAGATGAGGGGATTAGCTGGAGCGGAAGAACAAAATGTGCTCCAAATGATACTGAATGTGTGATCACTCTGAATGATATCTATCTATGGCTTCTCGTCACATTTTTTCTGTGGTTTGTACTTGCAATCTACTATGATAATATTATCCCAAATGCTTCAGGGGTAAGGAAACCAGTTTATTATTTTCTAAATCCCGGATATTGGACAGGAAAAGGTGGAGACAAGGTGGCAGAGGGTGGCCTTTGCAATTGCATAACTTCAGCTCCACCATTGGAGCATGTTACCCCAGATGATGAAGATGTCCTAGAGGAAGAGAACACAGTAAAACAACAAATAAGTGAGGCTGTTGTAGATCCAAATGTTGCAGTTCAAATACGTGGCCTTGCAAAGATGTATCCAGGGACCACAAATATTGGTTGCTGTAAATGCAATAAGACAGCTCCTTACCATGCTGTCAAGGGATTGTGGGTGAATTTCGCAAAAGATCAGTTGTTTTGTCTTTTGGGACCTAATGGTGCTGGGAAAACTACAGCAATCAATTGCTTGACTGGGATAACCCCAGTAACAGGCGGGGATGCACTAATATATGGATATTCTGTTCGAAGTTCTGTCGGCGTGTCAAAAATCAGAAAACTGATAGGGGTCTGTCCTCAGTTTGATATCCTGTGGGATGCATTGTCTGGTCAAGAGCATATTGATCTCTTCGCTAGTATCAAAGGCCTTCCCCCACCTAATGTGAAATCGATCACAGAACAGTCGTTAGCAGAGGTGAGACTGACGGAGGCTGCCAAAATGAGAGCTGGGAGTTACAGTGGAGGGATGAAACGCCGCCTCAGTGTGGCAATTGCCCTTATCGGTGACCCTAAATTGGTTATTCTGGATGAGCCGACAACTGGTATGGATCCAATAACAAGAAGGCATGTATGGGACATAATAGAAGATGCCAAGAAAGGGCGTGCCATTCTTCTTACAACACATTCAATGGAAGAAGCAGACATTTTGAGTGATCGTATTGGAATCATGGCAAAAGGAAGGCTCCGCTGCATTGGCAATTCAATCAGGTTGAAATCAAGATTTGGCACTGGCTTTGTAGCTAATGTTAGCTTTTCTGGACATAACAATGGGCAAAATCCTTTAAATGGGGAAGAAGTTTCTAGAGCTGATCATGAGGCAGTAAAGAAATTCTTTATGGATCATCTGGATGTAGCACCCAAAGAGGAGAATAGTGCTTTCTTAACTTATATTATACCTCATGACAGAGAAGTTCTTTTGAAAAGCTTTTTTGAGGAGCTTCAAGATAGACAAGATGAATTTGGCATTTCTGATATTCAACTTGGTCTCACAACTCTTGAGGAAGTATTCTTGAACATAGCCAAGCAAGCAGAACTAGAAAGTGCTGCAGCTGAAGGACGCCTGGTGACTTTTACTTTAACATCTGGAGAATCGGTTCAGATACCTGTTGGAGCTAGATTTGTGGGTATACCAGGGACAGAATCGGAAGAATATCCAAGAGGGATTATGGTGGAGGTATACTGGGAGCAAGATGATACTGGAGCCCTCTGCATTTCTGGCCATTCATCAAACATGCAAGTTCCTCCTCATGCTCCAACTCTGGCCACTTCAGCCTCTACTACTGCACGCAGAAATCTCTTGGGGAGAAATGGACCTGTTCACGGGATTGTCTTTGATCCCAATCTAATGAATAGCACCAACAGAAGTCGACAGTATTAA 2913 0.4229 MNLQSGFPLLLQQFTALFKKNFLLSWRNKRAFFLQLFSSFFFMFLIFFIEKAIDARYSSSTLFQSVTDPEPLVSPPIPPCEDKFYVKLPCYDFVWSGNGSSKVDTIVDRIMVNNPGRPIPSNKVLSFRTSTEVDEWLFTNPMHCPGALHFMERSASVISYGIQTNSTPLAKRGQYEDPVFKFQIPLQVAAEREIARSLIGDPNFSWIVELKEFAHPAVEKFSAVGTMGPTFFLAIAMFNFVLQISSLVTEKELKLRQAMTLMGLFDSPYWLSWLSWEGIITLLSSLFLVLFGMMFQFDFFLNNNFGVVFFLFFLFELNMTGFGFMLSAFISKSSSATTLGFFIFIIGFLTQLVTIFGFPYSKSFSKPLQIIWSFFPPNLLAQGLSLLSGATSTPQDEGISWSGRTKCAPNDTECVITLNDIYLWLLVTFFLWFVLAIYYDNIIPNASGVRKPVYYFLNPGYWTGKGGDKVAEGGLCNCITSAPPLEHVTPDDEDVLEEENTVKQQISEAVVDPNVAVQIRGLAKMYPGTTNIGCCKCNKTAPYHAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTGGDALIYGYSVRSSVGVSKIRKLIGVCPQFDILWDALSGQEHIDLFASIKGLPPPNVKSITEQSLAEVRLTEAAKMRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIEDAKKGRAILLTTHSMEEADILSDRIGIMAKGRLRCIGNSIRLKSRFGTGFVANVSFSGHNNGQNPLNGEEVSRADHEAVKKFFMDHLDVAPKEENSAFLTYIIPHDREVLLKSFFEELQDRQDEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGRLVTFTLTSGESVQIPVGARFVGIPGTESEEYPRGIMVEVYWEQDDTGALCISGHSSNMQVPPHAPTLATSASTTARRNLLGRNGPVHGIVFDPNLMNSTNRSRQY* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00297 970 Pfam ABC-2 family transporter protein 223 438 IPR013525 GO:0016020|GO:0140359
Pte3g00297 970 Pfam ABC transporter 549 691 IPR003439 GO:0005524
Pte3g00297 970 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524|GO:0016887
Pte3g00297 970 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 492 858 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pte3g00297 970 CDD ABC_subfamily_A 517 750 - -
Pte3g00297 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 744 IPR027417 -
Pte3g00297 970 Gene3D - 517 761 IPR027417 -
Pte3g00297 970 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 517 762 IPR003439 GO:0005524
Pte3g00297 970 FunFam ABC transporter A family member 2 507 770 - -
Pte3g00297 970 SMART AAA_5 555 739 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00297 Pte-Chr3 2466140 2471582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00297 557 761 Calmodulin-binding Proteins AT2G36910 23.721 2.12e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00297 - - qsa:O6P43_022815 1461.05