Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00296 ATGGTTTCAGCAGATCATATCTCTGTTGTAAATGATAATATTGACAAGAAGGAACTGTTGGGCCTTCGGGCTGGATTGACTGGATCCTCATCCAACATCTCATCATTAATCATTATCATTACAGAGAGGTACCGTACCTTGTATATAAAACCAGAGACTGCGGTACAAGAGGGGACACCAAATTTAGAAGGACAGCGCAGAGAATCAGACATGGCGTTTGCTTTGAGAAAAACAGATGAAGAAGCTGAAAGGGTCATCGAAGATCAGGAGGATAGAAATGACTCCAGCGGTAGCGATACTGTTGGTAAAGAGACAATTCCTCCAGAGGCTAACGAGGTTGAATCAGCAATGAAGGCCGAAATGGGTGAGGTGAGAGAAGAAAATCAAAGGTTAAAAATGTACTTGGAAGAGATTATGAAGGAGTATAGTACACCCCAAAAGCAAATCCAAGGAAAAGATCCTGAAGAGCAAGAGGAATCAGAGCTCATTTCCCTCAGCCTGGGCACAAGTTCCAGTACCTGTCCCAAAAAGGATGCTTTGTGTAAAGGCTCTACAAATTGGATAGGAGATGATAATGGTCACCAGGACTTGGTTCTTGGGTTGGATTTGAACATGGAAACCCCTAAATCAGGTGGAAGCTTAACACAATCTTTTCCATCGAAGTCAAGCCCAGCCAACAGCTCTGAAGGACCAGAGGAAGAAGCTGGGGAGACTTGGCCACCACGTAAAACACTCAAGACAGTGAAACGTACTGTAGGGGATGATGAAGCAATAGAACAGAAGCCTACTAAAAAGGCTAGGGTTTGTGTACGAACAAGATGCGACACCCCAACGATGAATGATGGATGTAATTGGAGGAAGTACGGACAAAAGACTGCAAAGGGAAACCCTTGTCCTAGGGCTTACTATCGATGCACAATTGCACCGTCATGCCCAGTAAGAAAACAGGTGCAGAGATGTGCAAACGACTTGTCCATTTTGCTAACAACATATGAAGGAACTCATAATCACCCTTTGCCCATGTCAGCCAATGCAATGGCTTCCACCACATCTGCAGCTGCATCCATGCTTCTGTCTGGCTCATCAAGCTCCCAGCACACCACATTCCCCAACAATACTACAACTGCTGCTTCTCTTCATGGTGTAAACGTCTACCTGGATGACTCAAAACGAAAACAGTCATATTACTTCTCGAACACTGCTTCCATATCTTCATCTTCATTCCCCACGATCACTCTTGATCTAACTTATCCTCAAACCTTTTTCTCGTCATCACTCAACAGGTTTTCTAGTTCAAGCAACACTAACCCTCCAAGATATTCTTCCCCAACTCTCAACTTCAACTCTTCAGAACCATATGCAATGTCCTGGGGTAACGGGTTCCTTGGATATGGAAGCTCTCAAGCCTGTAGCTACAACAGCAACCTAGGGACTATAAACAGTGCCAGGCCCACACTACAAAATGTGTACCATTCTCTCCACATCCAAAACAACAGTCCAATTACTCTTCCTCAACATTCTCTACCACAAGATGCTGTGGCCGCTGCAACTGAAGCCATCACGGCTGACCCCAGATTTCAGTCAGCCCTAGCAGCTGCATTGTCCTCAATTATTGGCAGCACTGACCAAGGTAGTAATGGCCGTACTGTTATCCCAGGACATCAAATTGGTGGAGGAAACATTTCTCAAAGATTGAGTAACTGGAGCGATCAGCTCTATCCAATTCCTTCAGCACTGCAATCAACGTCAACAAAAGTAAACGTCTCGGCATCAAGCTTCCTAAATAACGAAGAATCAACAAATCCTCAGCCGGGAAGTTTGGTGTTTTTACCACCGTCGTCCTCATTTTCAATTGCTGGCTCCAAGCAAGTTCGCGTCTTCAACAAATGGGAATAA 1896 0.4473 MVSADHISVVNDNIDKKELLGLRAGLTGSSSNISSLIIIITERYRTLYIKPETAVQEGTPNLEGQRRESDMAFALRKTDEEAERVIEDQEDRNDSSGSDTVGKETIPPEANEVESAMKAEMGEVREENQRLKMYLEEIMKEYSTPQKQIQGKDPEEQEESELISLSLGTSSSTCPKKDALCKGSTNWIGDDNGHQDLVLGLDLNMETPKSGGSLTQSFPSKSSPANSSEGPEEEAGETWPPRKTLKTVKRTVGDDEAIEQKPTKKARVCVRTRCDTPTMNDGCNWRKYGQKTAKGNPCPRAYYRCTIAPSCPVRKQVQRCANDLSILLTTYEGTHNHPLPMSANAMASTTSAAASMLLSGSSSSQHTTFPNNTTTAASLHGVNVYLDDSKRKQSYYFSNTASISSSSFPTITLDLTYPQTFFSSSLNRFSSSSNTNPPRYSSPTLNFNSSEPYAMSWGNGFLGYGSSQACSYNSNLGTINSARPTLQNVYHSLHIQNNSPITLPQHSLPQDAVAAATEAITADPRFQSALAAALSSIIGSTDQGSNGRTVIPGHQIGGGNISQRLSNWSDQLYPIPSALQSTSTKVNVSASSFLNNEESTNPQPGSLVFLPPSSSFSIAGSKQVRVFNKWE* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00296 631 MobiDBLite consensus disorder prediction 77 98 - -
Pte3g00296 631 FunFam probable WRKY transcription factor 31 264 341 - -
Pte3g00296 631 Gene3D WRKY domain 264 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g00296 631 Pfam WRKY DNA -binding domain 280 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00296 631 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00296 631 MobiDBLite consensus disorder prediction 235 250 - -
Pte3g00296 631 SUPERFAMILY WRKY DNA-binding domain 271 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte3g00296 631 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte3g00296 631 MobiDBLite consensus disorder prediction 77 110 - -
Pte3g00296 631 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 99 546 IPR044810 GO:0003700
Pte3g00296 631 MobiDBLite consensus disorder prediction 208 229 - -
Pte3g00296 631 MobiDBLite consensus disorder prediction 207 250 - -
Pte3g00296 631 Coils Coil 117 141 - -
Pte3g00296 631 MobiDBLite consensus disorder prediction 144 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00296 Pte-Chr3 2458226 2464560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00296 121 563 WRKY Transcription Factor Family AT5G15130 39.721 8.54e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte3g00296 WRKY 9.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00296 - - dzi:111312397 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00296 3 2458226 2464560 Pte3g00296 3 2458226 2464560 RCT