Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00282 ATGGGGAATTGTAACGCTTGTGTGAGAGCAGAAGAGACCAAATCACAAAAGACCACCAATCACACAAGTCAGACGCATAAGAAGAAAAAGGAGAGTATACATAATCCATATTCGGAAGATCCAATCAGGTCACCGGTCCCGATCCGGGTACTAAAAGATGTCATTTCACTTAGTAACCGAACTCGAATCGGCGACAAGTACATATTGGGTCGGGAGCTGGGTCGTGGTGAGTTTGGAATTACCTATTTGTGCACTGACAAGGAGACAAAAGGCGAACTAGGTTGCAAGTCGATTTCGAAGCGGAAGCTGAGGACAGCGGTGGATATAGAGGACGTGAGGAGAGAAGTGGCAATCATATCCACACTGCCTGAACACCCAAACATCGTAAAGCTCAAAGCGACTTACGAGGACAACGAGAATGTGCACCTCGTGATGGAGCTGTGTGCTGGTGGTGAACTTTTTGATCGAATTGTGACTAGAGGGCATTACAGTGAGCGAGCCGCTGCTAACGTTGCTAAGTTTATAGCGGAGGTTGTGAGGATGTGTCATTCCAATGGGGTTATTCACAGAGATCTCAAGCCTGAAAATTTTCTCTTTGCTAATAAGAAAGAGAACTCGCCTCTTAAAGCCATTGATTTCGGTCTCTCTGTGTTTTTCAAGCCTGGTGAGATGTTTTCGGAGATTGTTGGGAGTCCATACTATATGGCTCCCGAGGTGCTGAAAAGAAATTATGGACCTGAGGTTGATATATGGAGCGCTGGAGTGATCCTTTATATTTTGTTATGTGGTGTTCCTCCATTTTGGGCCGAAACTGAACAAGGTGTTGCCCTTGCAATTTTGAGGGGGGCGATTGATTTTACGCGGGAGCCTTGGCCACAGATTTCGGAGAAAGCTAAAAACCTTGTACGGCAGATGTTAGAGCAAGACCCTAAGAAGCGCTTGACTGCCGAACAGGTGCTCGAACATCCCTGGCTACATAAGGCTAAGAAAGCTTCTAATGTTCCACTGGGAGATATTGTGAGGACAAGGCTAAAGCAGTTCTCTGTTATGAATAGATTCAAGAAGAGAGCACTTCGGGTTATTGCTGAGCATCTATCTGTTGAAGAAGTGGAAATAATCAAGGAGATGTTTACATTGATGGATACTGATAAAGATGGCAAGGTTACTTACGACGAACTGAAGGTTGGGATTCGGAAAGTTGGTTCTCAATTGGCTGAACCTGAAGTAAAGATGCTAATGGAAGCGGCTGATGTCAATGGAAATGGTGTACTGGACTACGGAGAATTTGTGGCAGTGACTATTCACTTGCAAAGGATGGAAAATGACGAGCATTTCCGCAAAGCATTCATGTTTTTTGACAAAGACGGGAGTGGGTATATTGAATTAGGTGAGCTACAAGAAGCACTGGCTGATGAGTTTGGTGAACCTGATTCTGATGTGCTAAATGACATCATGCGCGAGGTTGATACCGACAAAGATGGCCGCATCAGTTATGATGAGTTTGTTGCTATGATGAAAACTGGAACGGATTGGCGAAAAGCATCTAGGCAGTATTCAAGGGAAAGATTCAAGAGTTTGAGCCTAAACCTTATGAAAGATGGTTCGTTGCAACTCCATGACGGGCTCACTGGTCAAGCAGTTGTGGTTTGA 1650 0.4479 MGNCNACVRAEETKSQKTTNHTSQTHKKKKESIHNPYSEDPIRSPVPIRVLKDVISLSNRTRIGDKYILGRELGRGEFGITYLCTDKETKGELGCKSISKRKLRTAVDIEDVRREVAIISTLPEHPNIVKLKATYEDNENVHLVMELCAGGELFDRIVTRGHYSERAAANVAKFIAEVVRMCHSNGVIHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGEMFSEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVALAILRGAIDFTREPWPQISEKAKNLVRQMLEQDPKKRLTAEQVLEHPWLHKAKKASNVPLGDIVRTRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKEMFTLMDTDKDGKVTYDELKVGIRKVGSQLAEPEVKMLMEAADVNGNGVLDYGEFVAVTIHLQRMENDEHFRKAFMFFDKDGSGYIELGELQEALADEFGEPDSDVLNDIMREVDTDKDGRISYDEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGLTGQAVVV* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00282 549 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00282 549 FunFam Calcium-dependent protein kinase 1 69 152 - -
Pte3g00282 549 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Pte3g00282 549 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Pte3g00282 549 FunFam Calcium-dependent protein kinase 7 334 509 - -
Pte3g00282 549 Gene3D Transferase(Phosphotransferase) domain 1 153 333 - -
Pte3g00282 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pte3g00282 549 SUPERFAMILY Protein kinase-like (PK-like) 45 351 IPR011009 -
Pte3g00282 549 SMART efh_1 372 400 IPR002048 GO:0005509
Pte3g00282 549 SMART efh_1 480 508 IPR002048 GO:0005509
Pte3g00282 549 SMART efh_1 444 472 IPR002048 GO:0005509
Pte3g00282 549 SMART efh_1 408 436 IPR002048 GO:0005509
Pte3g00282 549 MobiDBLite consensus disorder prediction 1 41 - -
Pte3g00282 549 Gene3D - 334 509 - -
Pte3g00282 549 Pfam EF-hand domain pair 443 506 IPR002048 GO:0005509
Pte3g00282 549 Pfam EF-hand domain pair 373 432 IPR002048 GO:0005509
Pte3g00282 549 CDD EFh 444 506 IPR002048 GO:0005509
Pte3g00282 549 SUPERFAMILY EF-hand 353 532 IPR011992 -
Pte3g00282 549 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Pte3g00282 549 Pfam Protein kinase domain 69 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00282 549 FunFam calcium-dependent protein kinase 13 153 333 - -
Pte3g00282 549 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Pte3g00282 549 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Pte3g00282 549 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00282 549 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Pte3g00282 549 CDD STKc_CAMK 66 324 - -
Pte3g00282 549 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Pte3g00282 549 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Pte3g00282 549 Gene3D Phosphorylase Kinase; domain 1 68 152 - -
Pte3g00282 549 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00282 Pte-Chr3 2369653 2374712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00282 1 550 EF-hand Containing Proteins AT1G18890 79.273 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte3g00282 Pkinase 7.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00282 K13412 - qsa:O6P43_022790 951.814