Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00280 ATGAATTGGTTGAATAACAAATGGATAGCGAGCAGTGCGAGCGTTTGGATTCAGTGGAGCTGTGGTGCAACCTACACCTTTAGCATCTACTCGTCTGTTCTCAAGACAAGTCAGGGCTATGACCAATCCACCTTGGACACCGTCTCAGTCTTGAAGGATATGGGTGCCAACTTCGGCGTCCTTTCCGGCTTACTCTACACCGCAGTCATACCGTATAATGATCGCCCAGACTCATCGGGAACCTCGGCGAAATCGAAATGGAAGATCTTGCGTGCGCCATGGGTGGTCCTTGCCACTGGGGCAATCCAGTGCTTTGTGGGGTTCTTCTTCATATGGGCCTCCGTCGTCGGTCTGATCAATCGTCCACCGGTGCCGTGGATGTGCTTCTTTGCTTGGCTTGCAGCGAATGGTCAGTCTTTCTTGAACACCACAAACGTTGTCACAGGCTTACGCAACTTCCCTGAATACAGTGGCACCATCGTCGGCATCATGAAGGGATTTCTTGGTCTTAGTGGCGCGATCTTGGTTCAAATATATCATACGTTTTGCAACAACGACCCAACCACTTACCTTCTCATGCTGGCTTTGTTGCCCCCAGTCATCTGCTTATTCTTCATGCCCTTGGTGAGAATCCATGAAAAGATTGATGTGAATGACAAGAGACACTTGGATAGTATATCTACGGCGACTGTAATCATGGTCACTTATCTCATGTTCATAATACTACTGCAAAATGTACTCACTTTTCCTTCCTGGTTACGTGCTTTGACATTTACAATACTCATGGTTCTGCTTGCATCACCTTTTGGAATTGCTGTAAAAGCACTGTTGCAAGATTCGCAGAGAAAATCATTTGGGAGGGAACCCTTAGCAATCTCAAGCACTCCGGAGGATTATTCTGAAGAATATGATGAGCTGCCTGGCGTTGAGAACCAAGTGAAGACCATAAGTGACGGGATTTTGTCTTCTGATCAAGGAGAAGCAAATCTCTTGCAAGCTATGTGTACCATAAATTTTTGGTTATTGTTTATAGCGATGCTATCTGGATTGGGTTCTGGTTTGACAGTAGTGAATAACATTGCTCAGATAGGTCAATCTCTAGGCTACACCACTGTTGAGATCAACCATTTTGTTTCTTTATGGAGCATATGGAACTTCATTGGTCGATTTGGAGGAGGGTATTTGTCAGACTATATGATGCACACAAGAGGGTGGCCAAGACCTTCATTGATGGCCACAGGTTTAGCAATCATGATTCTTGGACATATAGTGATTGCTTCTGGATTCCCTGGAAATCTATATGTAGGTCCCGTTCTGGTAGGTATTTGCTACGGAATAAATTGGTCACTGATGCCAACCATAACCTCTGAGATATTTGGTATAAAGCACATGGGTACTATTTTCAACGCGATTGCTGCAGCAAGTCCGGTTGGATCATACATCTTATCTGTAAAAATTGTTGGGTATATCTATGATAAGGAAGCCAACATAGATGATTCATGCTCCGGTATTCATTGCTTCATGTCATCTTTTCTGATCGTAGCAGCCACCGGAACTAAAGAAGGAGGCACTGTACGAGAAGCTAGGATGAAGACGACGAAAGGCGGCAAGGTCATGAACCCTACAGATGCCTATAGGAAAGAGCTTCGCAAAAAGGAATTGAAACGGAACAAGAAAGAACGGAAGAAGGTGAGGGAGGAGGGGATTTTGAAGAAAGATCCTGAACAGATTAAGAAACAGATTGAGAACTTGGAAAACTTGAAAGCTGATGGCGCTTTGGACAAAGCAAGAAAGCACAAGAAGAGACAGCTACAGGACACCCTCCACCTTGTGTTGAAAAAAAGGAAGGAGTATGAGGAGAAAATGAAAGAAAAAGGTGAAGCCCCATTAATGTTCAGTCATTTGGGACCTCCTCGAAGGCAAACTACTGCTGAAGAAGAAGAGTCAAACACCCAATGCCTGAAGACTCTGTCTACTACCATCCAACATTGA 1992 0.4453 MNWLNNKWIASSASVWIQWSCGATYTFSIYSSVLKTSQGYDQSTLDTVSVLKDMGANFGVLSGLLYTAVIPYNDRPDSSGTSAKSKWKILRAPWVVLATGAIQCFVGFFFIWASVVGLINRPPVPWMCFFAWLAANGQSFLNTTNVVTGLRNFPEYSGTIVGIMKGFLGLSGAILVQIYHTFCNNDPTTYLLMLALLPPVICLFFMPLVRIHEKIDVNDKRHLDSISTATVIMVTYLMFIILLQNVLTFPSWLRALTFTILMVLLASPFGIAVKALLQDSQRKSFGREPLAISSTPEDYSEEYDELPGVENQVKTISDGILSSDQGEANLLQAMCTINFWLLFIAMLSGLGSGLTVVNNIAQIGQSLGYTTVEINHFVSLWSIWNFIGRFGGGYLSDYMMHTRGWPRPSLMATGLAIMILGHIVIASGFPGNLYVGPVLVGICYGINWSLMPTITSEIFGIKHMGTIFNAIAAASPVGSYILSVKIVGYIYDKEANIDDSCSGIHCFMSSFLIVAATGTKEGGTVREARMKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREEGILKKDPEQIKKQIENLENLKADGALDKARKHKKRQLQDTLHLVLKKRKEYEEKMKEKGEAPLMFSHLGPPRRQTTAEEEESNTQCLKTLSTTIQH* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00280 663 Pfam Major Facilitator Superfamily 341 491 IPR011701 GO:0022857|GO:0055085
Pte3g00280 663 Pfam WW domain binding protein 11 536 611 IPR019007 GO:0006396
Pte3g00280 663 Coils Coil 542 567 - -
Pte3g00280 663 CDD MFS_Mch1p_like 7 516 - -
Pte3g00280 663 MobiDBLite consensus disorder prediction 622 663 - -
Pte3g00280 663 SUPERFAMILY MFS general substrate transporter 269 494 IPR036259 -
Pte3g00280 663 MobiDBLite consensus disorder prediction 647 663 - -
Pte3g00280 663 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 519 - -
Pte3g00280 663 Gene3D MFS general substrate transporter like domains 333 612 IPR036259 -
Pte3g00280 663 Coils Coil 601 621 - -
Pte3g00280 663 Pfam Nodulin-like 7 67 IPR010658 -
Pte3g00280 663 Pfam Nodulin-like 92 272 IPR010658 -
Pte3g00280 663 SUPERFAMILY MFS general substrate transporter 12 214 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00280 Pte-Chr3 2351251 2355965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00280 1 516 Nodulin-like Gene Family AT1G74780 54.615 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00280 - - qsa:O6P43_022785 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00280 3 2351251 2355965 Pte3g00280 3 2351251 2355965 RCT