Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00278 ATGTCCCGAGAATCTTCTCCTGGTCCGATCCATTCCGACCGATCCTCAACTGAACCCAATTCCCAAAACCACGCTCCTGATTCCAAAACTGACACATCCACTTCCAAATACGACGCCCCAGCCCCTCCCATCACTCGTAGCAATCGCCCTTCTCGTGCCTGCACCATTCGAGCTGCTGCTCGCCTCTATGCAGCTTCTCAAGCCACCGCCGACCACAAACCCAAGCCCACCAAGAAGGAACAACAGCGAGGTTGCGAGGATTCAGCACACCAACCACAACAATGTAGCAAGATAATTACACAACTTGTAGACCCTCCCGAACCTTCTCAGTTGCCTCGCTGGAACATCCGTTCCATGTGGGAGTTAGCTTCTGTGCTCAATTTTTTGCATGTTTTTAGGGCCGTTTTGAATATCTCAACGGAATTCTCAGCAGAAGAATTCGAGACAGCGCTAATTACGCCCAATGACACATTGAGTGATATACATATGCCTTTATTGAAGGCAATTCCTCCCATTACACGAATGGCTCTTACACGTGATACTTGGATAACTGTATTATGCAGGAAATTAAGAGATTGGTGGCATTGGGTTGCTGATGGGGAACTGCCTATTGTTGCTTCACATGGGGTGGAGATTGAAACGTATAAGTTGCTTGATCCAGGCATTCGGGTGGTCATCTTGAAGGCACTATGTGACATTCGCGTTGAGCAAGAAGATATCCGAAGCTATATTGACAACTCGCTCAAACATGGTGTCCAGCTCTTATCTTTCCGTAAGGAACGTATTGGAGGTGATGCACAAGGAATTTCGTACTGGTATGAAGACGATCCAATTATGGGCCATAGGTTGTACCGGGAGATACGGAAGACTGAAGTCAAGAAATCAAAGACAAAAGGGTCTAATGTCCTTCCTTGTACAACGTACCTATGGGAAACGGTTGCCACCAATTTTGATGAATTTGAAGATGTTTCTGAAAAACTTTTCGCTAGTAAAAACAAAACAGAGGCTTCTTTGGGGAAAAAGTTGAAGATAGACATGCTTCCTGAGATAGAGAAGGTTCACAAGAAGAAAGAGAGGCTACTGAAAAAGCAACACAGACAGGCTCTCCTTCTCGACAATTTCCTTGGTGTTGATGGGCTAGCAGCAGGACGCTCACTTCGTGATAGGAAACCTGTGACCTACACTTTTGATGATTATGATCGGTCCATCAATGAGGCTATCAAAATCACCAAAAAGAAACAGCCATCCCCTGAGCCTCTACCTAGAAGAGAAGCACCAGTAAAACCTGAATTTTTGACTAATGGGAGTGGCCCTTCACATGCTCCTCAACATATGAATTTTTATGTGTCATCTCCAAAATATCCAGAGTCTGATGATGCTGAAGATGAGCATAAAAGCGAAGTATTGGATAGGAGCAATCGGCGAAGGAGAAGGTCTACACGATATTCAGTGAAAGACTTCGTTGAAGCAGTCTCAGATAATGAGGCAGACTTTGATAGTGATGACGATATTGTTGGAGAAGCCATTTATGATGAAGAGTATCTTAGGAAACGTAAGCAGAGGAGGAAATTTTCAAGTAGCTCTGAAGGAGATGATGAGTATCGGTGGGAAGAAGAAAATGCTGAAGAGGAAGAAGATGAAGATTCCATGAACATCAGTGAAGAAAGTGATGAGCCCCATAAATTCAAAAAATTGCCTGGCCGTACTAAAAGGGAGACTAAATCTAGGTCTGTGCATGACTTCCAATCTGGTCTAAGACGGAGTAAAAGAGCCACTAGAAACCGTATAAACTATAGAACATATGAATTCTCAGAATCAGAAACTGAATCAACGAAGCCTCAGAAATCAAATCATTCTGACGAACGCTTCAATGAATCCGAAAATGGTGATTTTTCAATGGAAAGTCAGGCTTCTGATGGAAATGATGATGATAAGGAGGATATTGAAATGGATCAATCTGCAGATGATGACGAGGAGGAAAACAAAATAGATCAGTCTGCTGAAGTGAACCCTTCAACATCGGACAAAGGTCAAAGGCAGCCTCCTGAGAAAAAGAGTGAACACCCTGAGCATGAGGAACTTGATGAAGGAATTGGGAAAAGACGTTTCCTGGACCTGAACGAGCTTGCCCCTGCTACAGGCTTTGATGATTGTCCAAACACAGTGAAAGACGAGGATAACAACAATTTCTAG 2193 0.4378 MSRESSPGPIHSDRSSTEPNSQNHAPDSKTDTSTSKYDAPAPPITRSNRPSRACTIRAAARLYAASQATADHKPKPTKKEQQRGCEDSAHQPQQCSKIITQLVDPPEPSQLPRWNIRSMWELASVLNFLHVFRAVLNISTEFSAEEFETALITPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGELPIVASHGVEIETYKLLDPGIRVVILKALCDIRVEQEDIRSYIDNSLKHGVQLLSFRKERIGGDAQGISYWYEDDPIMGHRLYREIRKTEVKKSKTKGSNVLPCTTYLWETVATNFDEFEDVSEKLFASKNKTEASLGKKLKIDMLPEIEKVHKKKERLLKKQHRQALLLDNFLGVDGLAAGRSLRDRKPVTYTFDDYDRSINEAIKITKKKQPSPEPLPRREAPVKPEFLTNGSGPSHAPQHMNFYVSSPKYPESDDAEDEHKSEVLDRSNRRRRRSTRYSVKDFVEAVSDNEADFDSDDDIVGEAIYDEEYLRKRKQRRKFSSSSEGDDEYRWEEENAEEEEDEDSMNISEESDEPHKFKKLPGRTKRETKSRSVHDFQSGLRRSKRATRNRINYRTYEFSESETESTKPQKSNHSDERFNESENGDFSMESQASDGNDDDKEDIEMDQSADDDEEENKIDQSAEVNPSTSDKGQRQPPEKKSEHPEHEELDEGIGKRRFLDLNELAPATGFDDCPNTVKDEDNNNF* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00278 730 Pfam DDT domain 124 169 IPR018501 -
Pte3g00278 730 MobiDBLite consensus disorder prediction 532 553 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 408 425 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 455 474 - -
Pte3g00278 730 PANTHER REMODELING AND SPACING FACTOR 1 45 689 IPR028938 GO:0006355|GO:0031213
Pte3g00278 730 MobiDBLite consensus disorder prediction 1 93 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 554 587 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 1 41 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 516 705 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 711 730 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 408 480 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 516 531 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 678 703 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 640 663 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 600 628 - -
Pte3g00278 730 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00278 Pte-Chr3 2341557 2347997 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pte3g00278 DDT 2.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00278 - - qsa:O6P43_022781 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00278 3 2341557 2347997 Pte3g00278 3 2341557 2347997 RCT