Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00273 ATGGACCCTCCGCTCATCAATGAATCCTCATTCTCTGCAGCTAACCCATCTGCTTACACATTAGCTGAGCTTTGGTCTCTTAGTGGGGAACCCGATGCTGGTGGTTTGGGCCTCCGAATGGGCACATTGGGACAGCAATTTACTGGGTTTGCTGACGCAGCGGCAAATCGAGACGGATCGCTAGAGGAGTCCACTGTCACCGAACAGAGTGCCGGCCGAGGCCGTTCTAGAAGCAATGTTGCCCGTTCTGGAAGCAAGAGGAAATATGTGAGCTTGCCGAACGATTCCTCGAAAATGCTCTCTACTAGTACTGCCGATGACTTGAATGATTCAAACATTAAACGGATAAAATTAGTGGGATCTAAAGTTGAAAATAATGGTTTGAATGCTGAACTGGGGACAAGTTCTGCAGCTGATGACAACTCAACTGAACAATTCACAAAACCACCTGAGCCACCCAAGCAAGATTACATACATGTGAGAGCAAGGAGGGGCCAAGCTACGGATAGTCATAGTCTAGCAGAAAGAGCAAGGAGAGAAAAAATCAGCGAGAGAATGAGACTACTTCAGGATTTGGTCCCAGGATGCAACAAGGTTATTGGTAAAGCACTCGTTCTTGATGAGATAATTAACTATATCCAATCATTGCAACGTCAGGTTGAGTTCCTGTCAATGAAGCTCGAAGCAGTAAATTCGAGAATGCAAATAAGCCATGCTATTGAAGGCTTTCCTTCAAAAGATCTTGGGGCACCAGCATTTGATGCTTCTGGGTTGATATTTGCATCACAAGCATCGAGGGGCTATCTTCAGGGGCCACAGCTCGAATGGCTACACATGCAATTAGGTGGTAGCTTTGAGAGAGCAACATAG 870 0.4621 MDPPLINESSFSAANPSAYTLAELWSLSGEPDAGGLGLRMGTLGQQFTGFADAAANRDGSLEESTVTEQSAGRGRSRSNVARSGSKRKYVSLPNDSSKMLSTSTADDLNDSNIKRIKLVGSKVENNGLNAELGTSSAADDNSTEQFTKPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMRLLQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMQISHAIEGFPSKDLGAPAFDASGLIFASQASRGYLQGPQLEWLHMQLGGSFERAT* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00273 289 MobiDBLite consensus disorder prediction 56 106 - -
Pte3g00273 289 Gene3D - 163 241 IPR036638 GO:0046983
Pte3g00273 289 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 236 IPR036638 GO:0046983
Pte3g00273 289 FunFam Basic helix-loop-helix transcription factor 163 235 - -
Pte3g00273 289 CDD bHLH_AtBPE_like 156 234 - -
Pte3g00273 289 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 216 IPR011598 GO:0046983
Pte3g00273 289 Pfam Helix-loop-helix DNA-binding domain 170 217 IPR011598 GO:0046983
Pte3g00273 289 MobiDBLite consensus disorder prediction 128 149 - -
Pte3g00273 289 MobiDBLite consensus disorder prediction 128 155 - -
Pte3g00273 289 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 259 IPR024097 GO:0006355
Pte3g00273 289 MobiDBLite consensus disorder prediction 60 106 - -
Pte3g00273 289 SMART finulus 172 222 IPR011598 GO:0046983
Pte3g00273 289 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00273 Pte-Chr3 2311505 2314161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00273 1 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 52.381 4.95e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte3g00273 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00273 - - cave:132175693 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00273 3 2311505 2314161 Pte3g00273 3 2311505 2314161 RCT