Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00259 ATGTTGATCCTTCTCATTTCTTCAACTGCAAGTTCAGAAGATGAAGAGGTGAAGCAAGCTCTTGTCAAATTCATGGACAATCTTATAAAAGTACCAGCAAATAAAGATGCCAACTTTGGTTGGAACCTGACTTCAGACCCCTGCATCAACAAATGGGCTGGTGTGACTTGTGATAGCAGCTCCACTCATGTAAAGAACATTGTTCTTAATGGTTTCAATTTGACTGGGGTGATCGACACCACTTCTCTTTGTGTATCACCTAGTCTTCTAGTAGTCAGCTTACAAGAGAACCGCTTTGAAGGTTTGCTCACAGAAGACATTGGCAAGTGCAGGTCTTTGACTCACTTATACATCAATGGAAATACTTTCTCTGGTGACCTTCCTAACTCTCTTGCTAAGTTAGTTAATCTAAAACGCCTTGACATTTCAGACAACAACTTCTCTGGGGCGATTCCAGATTTGAGTCCTATCTCAGGGTTGATAACTTTCCATGCTCAAAACAACATTCTAAGTGGACAATTACCCAACTTTGATTTCTCCAACCTTGTTAAGTTCAATGTCTCCAATAACAACTTGTCGGGTCCAATTCCTGATGTCAAAGACCGGTTCCATGCAGATAGCTTTACGGGTAATCCTAAATTATGTGGACCCCCACTTCTGAATGACTGTCCAGCCCCATCCCCTTCCCAAACTCCTCCTCTTATTTCTACTCCACCGCCTCCTGCCCAAGAATCATCACTTAGTCTTGGTACTTACTCAGGATTTATTATTCTTGCGGCAATTATTTTGTTAGTCTTCATTTTCAAAATTGTGAAGTATTGCAAATCAAAGAGAAAAGCATCAAATAGGACAGAAAAGGAAAGATTGGAATTAAATACTCATACTAGCAGTGACAAGCGTAGCGGAAGTTCCAACGGGTCGAAGATTACAAAGGGGAATAGATCAGAATATTCGGTTTCATCTGACCTATCATCATCATCATTGATGATTCTTTCAACTTCAGTGTTCAAGGAATTAAGATTTCAGGAGCTGCTCCGAGCTCCTGCTGAATTGATTGGAAGAGGAAAGAATGGAAGCCTCTACAAGGTGATGCTTGACAATTGGCCAGCTTTAGTTGTGAAGAGAATAAAGGATTGGCAAATTTCAAAAGAAGAATTTGAATGGAGGATCTACAAGATAGACAAAGTGAAACATCCATATGTGCTGCCACCTATTGCATTTTATTGCTCCCACCAAGAGAAGCTTTTGGTGTATGAATATCAGCAGAATGGTAGTCTCTTCCAGCTTCTCCATGGGTCCCAGAATGTCCGAAATTTTGACTGGGGAAGCAGGTTACATGTTGCTGCATGTGTAGCTGAGGGTCTAGCACACATGCATCATGAACTGCTGGGAGATAGGTTAGTACATGGAAATCTGAAATCTACAAACATTTTGTTCAACGAGAATGCTGATCCGTGCATTAGTGAATATGGTATAGTGATGGTTGAGAACCAAGATCAACCGATCCTATCTCAAACCAGAAGTCTCAGATACAGAAACACATCAGGGAATCTTTCACATGGGGCCTTCAAGGCTGACGTCTGTGCCTATGGTGTGCTCCTGCTTGAGCTGCTGACAGGGAAGTTGGTTCAAAACAATGGCATCGATTTAGCTGACTGGGTGAATTCAGTGGTTAGAGAGGAATGGACAGTTGAAGTTTTTGACAGGGCCCTAATGTTAGATGGTGCTAGTGAAGAAAGGATGGTCGACTTGTTGCAGATAGCAATGAAGTGCGTAAATGCACAAGCAAGTGACAGGCCAACTATGGCAGAGGTTGCAGTAATGATACTTGCACTGAAAGAAGAACATGAAAGGTCTATAATGTTTGAAAACAATATTTAA 1881 0.4147 MLILLISSTASSEDEEVKQALVKFMDNLIKVPANKDANFGWNLTSDPCINKWAGVTCDSSSTHVKNIVLNGFNLTGVIDTTSLCVSPSLLVVSLQENRFEGLLTEDIGKCRSLTHLYINGNTFSGDLPNSLAKLVNLKRLDISDNNFSGAIPDLSPISGLITFHAQNNILSGQLPNFDFSNLVKFNVSNNNLSGPIPDVKDRFHADSFTGNPKLCGPPLLNDCPAPSPSQTPPLISTPPPPAQESSLSLGTYSGFIILAAIILLVFIFKIVKYCKSKRKASNRTEKERLELNTHTSSDKRSGSSNGSKITKGNRSEYSVSSDLSSSSLMILSTSVFKELRFQELLRAPAELIGRGKNGSLYKVMLDNWPALVVKRIKDWQISKEEFEWRIYKIDKVKHPYVLPPIAFYCSHQEKLLVYEYQQNGSLFQLLHGSQNVRNFDWGSRLHVAACVAEGLAHMHHELLGDRLVHGNLKSTNILFNENADPCISEYGIVMVENQDQPILSQTRSLRYRNTSGNLSHGAFKADVCAYGVLLLELLTGKLVQNNGIDLADWVNSVVREEWTVEVFDRALMLDGASEERMVDLLQIAMKCVNAQASDRPTMAEVAVMILALKEEHERSIMFENNI* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00259 626 Pfam Leucine rich repeat N-terminal domain 18 58 IPR013210 -
Pte3g00259 626 MobiDBLite consensus disorder prediction 219 243 - -
Pte3g00259 626 Pfam Protein kinase domain 350 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00259 626 Pfam Leucine Rich Repeat 112 134 IPR001611 GO:0005515
Pte3g00259 626 SUPERFAMILY L domain-like 38 219 - -
Pte3g00259 626 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Pte3g00259 626 MobiDBLite consensus disorder prediction 296 319 - -
Pte3g00259 626 Gene3D Ribonuclease Inhibitor 179 223 IPR032675 -
Pte3g00259 626 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
Pte3g00259 626 Gene3D Ribonuclease Inhibitor 14 178 IPR032675 -
Pte3g00259 626 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00259 626 Gene3D Transferase(Phosphotransferase) domain 1 422 625 - -
Pte3g00259 626 MobiDBLite consensus disorder prediction 282 319 - -
Pte3g00259 626 SUPERFAMILY Protein kinase-like (PK-like) 349 608 IPR011009 -
Pte3g00259 626 PANTHER OS05G0588300 PROTEIN 8 614 - -
Pte3g00259 626 MobiDBLite consensus disorder prediction 219 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00259 Pte-Chr3 2195478 2197833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00259 18 613 Receptor kinase-like Gene Family AT5G58300 35.726 7.14e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte3g00259 Pkinase 9.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00259 - - qsa:O6P43_030895 690.263