Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00258 ATGGTTGCCAGGTCCTGTGTAAATTTGCTGGAATTGGTATCAGGTGACATATTGAATTTCTCACATACTCCTAGAGCTCCTCCAAGGGTTATGACTGTTCCAGGAACTCTTTCTGCTGCTGATGGAAGCAGGAACAAAGATGATGATTTATATGCTTCTTCACCTGCATGCCATGGGAAGACAATTATAGTGGCCAATGTTCTTCCTCTCAATGCTCAAAAGGATAAGGTATCAGGGAGATGGTGTTTTAGTTATGACGAAGATTCACTTTTCTTACAGCTAAAGGATGGGTTTGTTACTGATACCGAAGTAGTTTATGTTGGATCTCTTAAAGTTGATGTGGATACAAATGAACAAGAAGAGGTATCTCAAAAATTACTCGAGGATTTTAATTGTGTTCCTACATTTCTAGGTCCTGATCTTCAGAAACAGTTCTACCATGGATTTTGTAAACAATATTTGTGGCCCCTTTTCCATTATGTTCTGCCTTTGTATCCAGACTACAGCAAACGCTTTGACAGGTCATTGTGGCAGGCATATGTTTCTGCTAATAAGAAATTTGCAGACAAGGTCATGGAGGTGATCAATCCTGAATATGATCATGTATGGATTCATGATTACCACCTCCTGGTTCTTCCAACATTTTTGAGGAAACGGCATATCCGAGTTAAGCTGGGATTTTTTCTGCACAGCCCATTTCCTTCATCTGAAATATACCGAACCCTTCCTGTTAGAGATGAAATTCTGAAATCACTTCTTAATGCAGATTTAATTGGCTTTCATACATTTGATTATGCGCGTCATTTTCTGACATGTTGTAGCAGAATGCTGGGTTTGAAATATGAATCTAAACGTGGTTACATTGGGTTTGAGTATTTCGGTCGTACAATATATGTCAAAATTTTACCTGTGGGCATCCATATGCGTCGACTTGAATCTGCTGTAAGGCATCCCTCTTCTGCTATCAAAGTCAAAGAAATTCATGAGCAGTTCAATGGAAAAAAGCTTATCCTTGGGGTTGATGATATGGACATATTCAAAGGCATTAGTCTAAAGCTATTAGCGATGGAGCAACTCTTGCATCAGATTTCAGAGTTACGGGGCAAATTAGTCCTTGTCCAAATTATAAATCCAGCAAGGAGCGCAGGTAAAGATGTTCAAGAAGAAAAGGAGGAGATCTACATGGTTACTAGGAGGATAAATGAAGCATTTGGTTTCTCTGGTTATGATCCTGTTGTCCTCATCGATTATCCAGTTTCCTTTCATGAGAAGACAGCTTTTTATGCTTTGGCTGACTGCTGCATTGTAAATGCAGTAAGGGATGGCATGAACCTCATTCCATATGAGTACATAGTCTGCAGACAAGGGAGCTCTGAAATGGATCAAGCTTTAGAGATAGCCCCAAATTCCCCTCGTACAAGTACTCTTGTCATCTCAGAATTTATAGGCTGCACCCCATCTCTTAGTGGTGCAGTCAGGGTCAATCCATGGAATATTGATTCTGTAGTTGATGCAATACATATGGCTCTCAAGATGCCCGATAACGAGAAACAGCTTCGGCATGATAAGCACTACCGGTATGTAAGTTCTCATGATGTCGCCTATTGGGCCTGCAGTTTTATGCAGGATTTAGAGCGAGCATGCAAAGATCACAACAGTAAACGGAGCTGGGCCATTGGTTTTGGTCTGAGTTTGAGAATTTTGTCATTGTCTCCTAGTTTTAAGAAGTTGTCAATTGACCCCATTGTTTCTGTTTACAAAAGGACTAACCGAAGAGCAATCTTCTTGGACTACGATGGTACAGTGGTTCCCCAGGATTCACTTGTTAAGTCCCCCAGTCCTGAAGTTGTTGCTGCTCTAAATAGACTTTGCTCTGATCCTAAGAACACTGTGTTTATAGTGAGTGGCAGAGGGAAAGCCTCATTGAGTGAATGGTTTGATCAATGCGAACTCCTTGGTATAGCAGCTGAGCATGGTTACTTCATAAGGTGGAGTAAAGATTCCAACTGGGAAACTGCTCGGGTAAATGAAGATTTTGATTGGAAACAAATTGCTGAGCCAGTGATGAGACTCTACACGGAGGCAACAGATGGGTCGTATATAGAGACCAAGGAGACTGCTTTGGTATGGCAACACCAAGATGCTGATCCCGATTTTGGGTCTTGCCAAGCAATGGAGATGTTAGATCATCTTGAGAATGTCCTTGCCAATGAACCCGTTGTTGTTAAAAGGGGTCAGAACATTGTCGAAGTCAAGCCTCAGGGTCTTACGAAAGGAATAGTTGCAGATAAGGTTCTTTGTGCATTGACAAGCGATGGAACGCCACCTGATTTTGTGTTGTGCATTGGAGATGACAGATCGGACGAGGACATGTTTGAAACCATAACAACCAAGGCTTACAGTGAGACACCCCCAGAGATATTTGCATGCACTGTTGGTCAGAAACCAAGCAAAGCTCGTTACTATCTGGATGATCCAGTAGATGTAATGATGTTGCTTGAAAGCCTCGCCGACGCTTCGGCTTCCAAATGA 2532 0.4179 MVARSCVNLLELVSGDILNFSHTPRAPPRVMTVPGTLSAADGSRNKDDDLYASSPACHGKTIIVANVLPLNAQKDKVSGRWCFSYDEDSLFLQLKDGFVTDTEVVYVGSLKVDVDTNEQEEVSQKLLEDFNCVPTFLGPDLQKQFYHGFCKQYLWPLFHYVLPLYPDYSKRFDRSLWQAYVSANKKFADKVMEVINPEYDHVWIHDYHLLVLPTFLRKRHIRVKLGFFLHSPFPSSEIYRTLPVRDEILKSLLNADLIGFHTFDYARHFLTCCSRMLGLKYESKRGYIGFEYFGRTIYVKILPVGIHMRRLESAVRHPSSAIKVKEIHEQFNGKKLILGVDDMDIFKGISLKLLAMEQLLHQISELRGKLVLVQIINPARSAGKDVQEEKEEIYMVTRRINEAFGFSGYDPVVLIDYPVSFHEKTAFYALADCCIVNAVRDGMNLIPYEYIVCRQGSSEMDQALEIAPNSPRTSTLVISEFIGCTPSLSGAVRVNPWNIDSVVDAIHMALKMPDNEKQLRHDKHYRYVSSHDVAYWACSFMQDLERACKDHNSKRSWAIGFGLSLRILSLSPSFKKLSIDPIVSVYKRTNRRAIFLDYDGTVVPQDSLVKSPSPEVVAALNRLCSDPKNTVFIVSGRGKASLSEWFDQCELLGIAAEHGYFIRWSKDSNWETARVNEDFDWKQIAEPVMRLYTEATDGSYIETKETALVWQHQDADPDFGSCQAMEMLDHLENVLANEPVVVKRGQNIVEVKPQGLTKGIVADKVLCALTSDGTPPDFVLCIGDDRSDEDMFETITTKAYSETPPEIFACTVGQKPSKARYYLDDPVDVMMLLESLADASASK* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00258 843 Gene3D Glycogen Phosphorylase B; 55 313 - -
Pte3g00258 843 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 838 IPR001830 GO:0003824|GO:0005992
Pte3g00258 843 Gene3D Glycogen Phosphorylase B; 314 529 - -
Pte3g00258 843 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Pte3g00258 843 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Pte3g00258 843 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 843 - -
Pte3g00258 843 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Pte3g00258 843 CDD GT20_TPS 62 545 IPR001830 GO:0003824|GO:0005992
Pte3g00258 843 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Pte3g00258 843 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Pte3g00258 843 Coils Coil 837 843 - -
Pte3g00258 843 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Pte3g00258 843 NCBIfam trehalose-phosphatase 590 837 IPR003337 GO:0003824|GO:0005992
Pte3g00258 843 SUPERFAMILY HAD-like 592 837 IPR036412 -
Pte3g00258 843 CDD HAD_TPP 593 831 - -
Pte3g00258 843 Gene3D - 721 843 IPR023214 -
Pte3g00258 843 Gene3D - 591 709 IPR023214 -
Pte3g00258 843 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Pte3g00258 843 Pfam Trehalose-phosphatase 595 826 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00258 Pte-Chr3 2187332 2192535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00258 1 842 Trehalose Biosynthesis Gene Families AT1G23870 67.337 0.0 1227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00258 K16055 - qsa:O6P43_022731 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00258 3 2187332 2192535 Pte3g00258 3 2187332 2192535 RCT