Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00238 ATGCAGAGCACGGCCTTCAATCACTCTCTTTCAATTCCTCTGCACAAATCTCGCACCTACTTGCCTTCCAGTCGTGTCTCCGCTCGCTTCGATCCGATACATATCTCTGCGTCGTGCTCCAAACACAATGGGTCCAGAAGCTTCTCTGATGTCGCGCCTCGCCGATCCTGGTCACTTCTTGCTTCCACTTACTCTGATTCCAAACTCAGGCCATGGAGTTCGTTTCCTCCAATCGCTTCTTCTGATTCGGATTCGACCAGTTTCGAGGTGAAGGCAACTTCGGTGCCTGACAGTGCGGGTGAGGCCAACCCCGGTTCTAGCGCCTTGTTCCAAACGTTGCAACTTGGGGCTCTTTTTGGACTGTGGTACCTCTTCAATATATACTTCAACATCTATAACAAACAGGTATTGAAGGTCTATCATTTCCCCATAACTATTACTTTAATTCAATTTACCGTTGGCTCTGCATTTGTATTGTCCATGTGGAGTTTGAATCTCTACAAAAGGCCTAAAATCAGTGGTGCTCAGCTCGCAGCAATATTGCCTCTGGCAATGGTGCACACACTAGGGAACCTTTTCACAAACATGAGTCTGGGAAAGGTGGCGGTGTCATTCACTCACACCATTAAGGCTATGGAGCCGTTCTTTTCAGTTATCCTCTCTGCTATGTTCCTTGGTGAGACGCCCACTGGATGGGTGGTCGCTTCCCTGGTCCCAATTGTCGGTGGGGTGGCATTGGCATCAGTTACAGAGGCCTCTTTCAATTGGGCTGGATTCTGGAGTGCCATGGCTTCCAATTTGACATTCCAATCTCGTAATGTCCTTAGCAAAAAGCTCATGGTTAAAAAAGAGGATTCCATGGACAACATAATGCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTACTGGCTCCCGTTGCTTTCTTTATGGAAGGCGTGAAATTTACCCCTGCATACCTGCAATCTGCAGGGATAAATGTAAAGCAGCTATACACCAGAGCCCTTATTGCTGCTCTCTGTTTTCATGCTTATCAACAGGTCTCTTACATGATATTGCAAAGGGTTTCCCCTGTCACACATTCTGTAGGAAATTGTGTCAAGAGAGTTGTGGTTATTGTCAGCTCCGTCCTCTTCTTCCGAACCCCCGTTTCACCTGTTAATGCTCTTGGCACTGGGATTGCTCTTACTGGAGTTTTCCTCTATTCAAGGGTGAAACGCATTAAGCCAAAAACGAAGACTGCTTGA 1248 0.4663 MQSTAFNHSLSIPLHKSRTYLPSSRVSARFDPIHISASCSKHNGSRSFSDVAPRRSWSLLASTYSDSKLRPWSSFPPIASSDSDSTSFEVKATSVPDSAGEANPGSSALFQTLQLGALFGLWYLFNIYFNIYNKQVLKVYHFPITITLIQFTVGSAFVLSMWSLNLYKRPKISGAQLAAILPLAMVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGETPTGWVVASLVPIVGGVALASVTEASFNWAGFWSAMASNLTFQSRNVLSKKLMVKKEDSMDNIMLFSIITVMSFLLLAPVAFFMEGVKFTPAYLQSAGINVKQLYTRALIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFRTPVSPVNALGTGIALTGVFLYSRVKRIKPKTKTA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00238 415 Pfam Triose-phosphate Transporter family 113 403 IPR004853 -
Pte3g00238 415 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 113 413 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pte3g00238 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 407 - -
Pte3g00238 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 249 - -
Pte3g00238 415 PANTHER SOLUTE CARRIER FAMILY 35 114 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00238 Pte-Chr3 2042643 2047427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00238 1 416 Antiporters AT5G33320 70.406 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00238 K15283 - zju:107418346 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00238 3 2042643 2047427 Pte1g01959 1 40869268 40872618 RCT
Pte3g00238 3 2042643 2047427 Pte3g00238 3 2042643 2047427 RCT