Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00222 ATGGAGGACGATGATCCTATACCAATGAAAGCAAGGGATTTTTATGCTAGAAGAATGTACTGGTTGCCAGAAGATGAAGATAGTTCCGAGGAAATCATTTGCCCTTCACTAACAACTAGTCACTTTGCAGGATGCAAAAGTTATCCCAATGATACTGATCAATCCCAAGAAATCATGGAGATGTCCGCAGATAAACTTAGTGATGATAGATGCACCAAAATCAAAAGCAGTGAGGGAGATGGGTTTGGGAATGAAATTTATGTAGCTGTTGGCGAAGAGGACTTGGAGTTGGTGAAATGGACACTTGATCACCATGCCGTTCATCCAACTTCTGCCACAGTTGTTCTTGTTCATGTTTATCCTCCTATTACATATGTCCCTACACCAGTTGGGAAGTTTCCAAGAGACAAACTGAACCAGGAGCAAGTTGCAACTTACATGGCTGAAGAGAAGAACAGGAGGAAGTATCTTCTGCAGAAGTACGTGGACCTGTGCACTGATGCCAAGGTAAATGTTGACACCTTATTTCTGGAGAATGATGATATAGCCCAGGCAATGGTTGATGTTATCTCCAATCTTGAAATTACTAAACTCATCATGGGGACAAACAAGCTGCCAACTACTTGGGGATTGACAAAGCAGATACCAAAGGGAGCATATGTGAAGAGAAAAGCACCAGAGTCTTGTCAAGTGATCGTAGTTTATCAAGGCAAGATGGTTGTTGACAAGCAACGTCTGGTGGACACAGTTTTTCCATCCCCACCGACTCGTCAGCAATTAAAGCGCAGAGGCAGTTTTCCTGAAAACACCTTGTTTATGTGCTTTGGAAAAAATAGCTTAGGCCAGCACTAA 852 0.4261 MEDDDPIPMKARDFYARRMYWLPEDEDSSEEIICPSLTTSHFAGCKSYPNDTDQSQEIMEMSADKLSDDRCTKIKSSEGDGFGNEIYVAVGEEDLELVKWTLDHHAVHPTSATVVLVHVYPPITYVPTPVGKFPRDKLNQEQVATYMAEEKNRRKYLLQKYVDLCTDAKVNVDTLFLENDDIAQAMVDVISNLEITKLIMGTNKLPTTWGLTKQIPKGAYVKRKAPESCQVIVVYQGKMVVDKQRLVDTVFPSPPTRQQLKRRGSFPENTLFMCFGKNSLGQH* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00222 283 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 50 252 - -
Pte3g00222 283 Gene3D HUPs 82 212 IPR014729 -
Pte3g00222 283 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 93 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00222 Pte-Chr3 1932030 1934104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00222 85 240 U-box Gene Family AT5G65500 31.098 7.90e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00222 - - qsa:O6P43_030831 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00222 3 1932030 1934104 Pte3g00222 3 1932030 1934104 RCT