Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00213 ATGGGAAAGAAAGGGAACAATTGGTTCTCGTCGGTGAAGAAAGCTTTCAAGTCAGCTTCTAAGGACTTGCCGGAGAAAAAGAAGGGTAATGTAGAGAAATGGCAACACGAAGCCCCAGAAGTGGTTTCGTTTGAGCATTTTCCCACAGCAAGCTCCCCAGACATCACTCATGAAGAGAGTACTACTGCATCTCCAACAGAAGCCGAGGATAGGAATCATACAATTGTTGTAGCAGAGGCGACTGCGGTTGCGGCTGAAGCTGCTGCTGCTGCAGCTCAAGCAGCGGCGGAAGTTGTGAGGTTGGCTGGTCATGGACACCATTCGAAGGAAGAAAGAGCAGCAATTTTGATTCAATCATACTACAGAGGATATCTAGCTCGACGTGCACTGCGTGCTTTGAAAGGGTTAGTGAGGCTTCAAGCACTTGCGAGGGGTTACAATGTGTGCAAGCAAGCACAAATGACAATGCGCTGCATGCAAGCACTAGTCCGAGTACAGGCAAGAGTAAAAGCTCGAAGACTCAGATTAGCTCAAGAGAAGCTTCACAGGAAAATGGAGGAAGAACAAAGAGTAGTTCGAGGGAAAGCTAAATCACAACAGCTACATCATAAACATGCTAGACAATCCGACTATGAAGGTTTTGACATTGCACCTTATGATGCGAATGAGAGTGGAAATCCTCAATGGGGTTGGAATTGGCTTGAGAGTTGGATGTCATCACATCACTCTAGCGCAAACGAGGGCTCTTATATGACTATGGCTACTCCAACCTGCACAGATAATATGTCGGAGAAAACTTTGGAGATGGATAGTGTTGCGCACATGAGTACAAGTATCCATTTGGGCCTGATCAATGAAGATATGTTTAAGGGAAACCCAAGTTCTCGACACAAAACAAAAAAATCAAGCCCAAGTAGGTTACCTAGCTTCATGACCCCAACCAAGTCAGCGAAGGCCAAGGTGAGGAGTCAAGGAACTTTCAAGCCGCATATACCAAATGGGCCTCAGTGGGACCCTTCAACAAAGAGAACTGTGAATTCGGGATGTGACTCTTCAAGCTCTTTTGGAGAAATAGCTTCTCATCAATACTCAAGGAGCCCAAGTCCAACAACAAATAACATTCGTCCTCATTCTAGAAGAATTGGAGGCCCAATTCCAAAGGGGGTTGGGGATTGGGCCAGGGCACTAGGGCGTGTTGAATGGGGATAG 1209 0.464 MGKKGNNWFSSVKKAFKSASKDLPEKKKGNVEKWQHEAPEVVSFEHFPTASSPDITHEESTTASPTEAEDRNHTIVVAEATAVAAEAAAAAAQAAAEVVRLAGHGHHSKEERAAILIQSYYRGYLARRALRALKGLVRLQALARGYNVCKQAQMTMRCMQALVRVQARVKARRLRLAQEKLHRKMEEEQRVVRGKAKSQQLHHKHARQSDYEGFDIAPYDANESGNPQWGWNWLESWMSSHHSSANEGSYMTMATPTCTDNMSEKTLEMDSVAHMSTSIHLGLINEDMFKGNPSSRHKTKKSSPSRLPSFMTPTKSAKAKVRSQGTFKPHIPNGPQWDPSTKRTVNSGCDSSSSFGEIASHQYSRSPSPTTNNIRPHSRRIGGPIPKGVGDWARALGRVEWG* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00213 402 MobiDBLite consensus disorder prediction 304 321 - -
Pte3g00213 402 Pfam IQ calmodulin-binding motif 111 131 IPR000048 GO:0005515
Pte3g00213 402 PANTHER IQ-DOMAIN 5-RELATED 1 360 - -
Pte3g00213 402 Pfam Protein of unknown function (DUF4005) 294 338 IPR025064 -
Pte3g00213 402 MobiDBLite consensus disorder prediction 45 69 - -
Pte3g00213 402 Coils Coil 171 191 - -
Pte3g00213 402 Gene3D - 107 161 - -
Pte3g00213 402 SMART iq_5 109 131 IPR000048 GO:0005515
Pte3g00213 402 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Pte3g00213 402 MobiDBLite consensus disorder prediction 337 377 - -
Pte3g00213 402 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Pte3g00213 402 MobiDBLite consensus disorder prediction 291 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00213 Pte-Chr3 1893596 1897923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00213 1 372 IQD Protein Family AT3G49260 42.670 4.63e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00213 - - zju:107414775 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00213 3 1893596 1897923 Pte3g00213 3 1893596 1897923 RCT