Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00198 ATGCAGCCGGATCAATCCTCTGAGCAGGAAGCCGATGATCCTGATTCTGAGTTTGTCGAGGTTGATCCCTCTGGTCGATACGGTCGGTACAAAGAGGTTCTGGGCAGGGGAGCATTCAAGAAAGTATATCGGGGTTTCGATAAGTTGGAAGGAATTGAAATAGCATGGAATCAGGTGAAGGTTGCAGATCTTCTGAGGAACTCTGTTGATATGGAGCGTCTATACTCAGAAGTTCATTTGCTCAAGACTTTGAAGCACAAGAATATTATAAAATTTTATAATTCATGGGTTGAAACTAAAAATGAGAATATCAACTTCATTACTGAAATCTTTACATCTGGGACGCTACGCCAATATCGGAAGAAACATAAGCATGTTGATGTGAGAGCATTGAAGAAGTGGTCTAAGCAGATTTTAGAGGGCCTTTTGTATCTCCACAGTCATGATCCACCAGTCATTCATCGAGATCTTAAGTGTGACAACATTTTTGTAAATGGAAATCAAGGTGAAGTCAAAATTGGTGATCTGGGACTGGCTGCCATACTTCACCGCCGCTCTGCTCACAGTGTGATTGGTACGCCTGAGTTTATGGCCCCCGAGCTTTATGAAGAAGAATATAATGAGCTGGTTGACATCTACGCTTTTGGCATGTGCTTACTAGAGTTGGTAACCTTTGAGTATCCATATGTGGAATGTTCCAATGCTGCCCAGATATACAGAAAAGTGACTTCTGGAGTAAGGCCCGCATCACTGGCGAAAGTGAAGGATTCCAGAGTTAAGGCATTTATAGAGAAATGTATAGTAAAAGTTTCAGAGCGTTCGTCGGCAAAGGACCTTCTCATGGATCCCTTTCTCCAAGCAGAAAATGATCATGGTAGCATAGGTCATACTATACACCCACATAATCACTCGGAAGGCATTATTGGTAGAGATTTCAAGGTTCAAGGCCAGAGGAAAGATGTGAATACTATATTCCTTAAACTGAGAATAGCAGACTCCTCAGGTCATTGTCGGAACATTCATTTTCCTTTTGATATTGAGGAAGACACAGCAATTGCTGTTGCCAGTGAAATGGTTGAGGAGTTAGACCTCACAGATCAAGATGTTACAGCAATTGCTGCTATGATTGACTCAGAAATTCAAACCCTCATTCCAGGTTGGAGTTCAAATGAAATTAATGGAGATGAGTTTGACGAAGACACACCAACACATGCTAACTACGTTTCTGAAATCAGAGATGTGGCTTCCCCATTTAGTAATGAGTCTGACTCTTCTACCAGTAGTTTTAGATTGGAGAAATTGCCTTCTGGTCGCATGTATTGGTCTGACTTTCCAAAAATTGTTGTGGGGAGGTCTCCATCAGCACATAGTGATTCAAATATGACTTCTCAGTCTGACATGATCTACAAGTGTGATAACATCACTAGAAATAATCCTACTTCACCTGGCAAGGGATCAGATCAGTGCATTCGTGGTGATGGTAATGTCGAAAAGAATGCTGCGTTCCTAACGAAAACCCATTCCAGGGATGATAATTCAAACAGGGATACAAAAGCAATGAACGTAGGGCAAATTTCAAAAGAAAATTTGAGAGGAGGTGCAGAATCAGATTACATGGACACGATTATGAAGAGATTGGAGGAACTGTTGTTGTTACAAGAAAATGAAGTTAAAGAGCTTAGGAGAAAGCATGAATCAGAAGTGTCAGATCTTATGAAGGAATTTTATCCTGAAACACGTAGAAGAATTTTAACTATGTGCAAGCTGAAGTTATCTTTTGGAAATGAACAGTGA 1794 0.4075 MQPDQSSEQEADDPDSEFVEVDPSGRYGRYKEVLGRGAFKKVYRGFDKLEGIEIAWNQVKVADLLRNSVDMERLYSEVHLLKTLKHKNIIKFYNSWVETKNENINFITEIFTSGTLRQYRKKHKHVDVRALKKWSKQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILHRRSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECSNAAQIYRKVTSGVRPASLAKVKDSRVKAFIEKCIVKVSERSSAKDLLMDPFLQAENDHGSIGHTIHPHNHSEGIIGRDFKVQGQRKDVNTIFLKLRIADSSGHCRNIHFPFDIEEDTAIAVASEMVEELDLTDQDVTAIAAMIDSEIQTLIPGWSSNEINGDEFDEDTPTHANYVSEIRDVASPFSNESDSSTSSFRLEKLPSGRMYWSDFPKIVVGRSPSAHSDSNMTSQSDMIYKCDNITRNNPTSPGKGSDQCIRGDGNVEKNAAFLTKTHSRDDNSNRDTKAMNVGQISKENLRGGAESDYMDTIMKRLEELLLLQENEVKELRRKHESEVSDLMKEFYPETRRRILTMCKLKLSFGNEQ* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00198 597 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Pte3g00198 597 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 326 380 IPR024678 GO:0004674|GO:0005524
Pte3g00198 597 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Pte3g00198 597 CDD STKc_WNK 26 285 - -
Pte3g00198 597 FunFam probable serine/threonine-protein kinase WNK9 111 290 - -
Pte3g00198 597 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g00198 597 SMART serkin_6 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00198 597 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 573 - -
Pte3g00198 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pte3g00198 597 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Pte3g00198 597 ProSiteProfiles Protein kinase domain profile. 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00198 597 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Pte3g00198 597 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00198 597 Coils Coil 543 574 - -
Pte3g00198 597 Gene3D - 322 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00198 Pte-Chr3 1800390 1804674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00198 16 390 MAP Kinase Kinase Kinase AT3G22420 51.927 1.18e-159 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte3g00198 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00198 K08867 - zju:107418314 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00198 3 1800390 1804674 Pte3g00198 3 1800390 1804674 RCT