Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00194 ATGCAAGCTGTTGACCAAGAGTATGATTTGAAGCAAATGAGAGATATGGCAGCTGCTAGAAAGAGATGGGAAGCTCTGTTACGAGAAGAAAAAGTTAAAGTTCTCACACCCCGGGAAGCTGGGTATGCAATTCAACTCTCTAACAAGGCCTTACTTGATGTTCGCCCCTCCCATGAACGCCAAAAGGCTTGGGTCAAAGGTTCAGCATGGATTCCAGTATTTGATGTTGACAATAAACTAGATGCTGGAACTCTGTCTAGAAAGATCACAAATTTCATGATGGGAGGTTGGTGGAGTGGCATGCCTACACTATCTTATAATAGCCAGTTCTTAGAGAAAGTTAAGGAGAAGTTCCCAGAAGACACGGACATAATCGTTGCATGCCAGAAGGGACTAAGGTCATTAGCTGCTTGTGAGTTGCTTTATAATGCTGGATATAGAAACGTTTTCTGGGTTCAGGGGGGTCTGGAAGCTGCTGAAGAAGAGGAACTAACCAGTGAAGGGCCCGTGCCAATTAAATTTGCTGGAATTGGTGGAGTTTCAGAGTTTTTAGGTTGGACTGATCAACAAAGAGCTGCTGCCGCCAAAGAAGGTTGGGGTTATAGATTGATGTTTTCTGCACGCCTGGTCGGAGTCTTTCTTCTTGCTGATGCCTTATTTATTGGTGCTCAGAGAGTTGGAGATTATCTTCAGGATCTGCGGTCTCATTGA 711 0.4444 MQAVDQEYDLKQMRDMAAARKRWEALLREEKVKVLTPREAGYAIQLSNKALLDVRPSHERQKAWVKGSAWIPVFDVDNKLDAGTLSRKITNFMMGGWWSGMPTLSYNSQFLEKVKEKFPEDTDIIVACQKGLRSLAACELLYNAGYRNVFWVQGGLEAAEEEELTSEGPVPIKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLMFSARLVGVFLLADALFIGAQRVGDYLQDLRSH* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00194 236 SMART rhod_4 35 165 IPR001763 -
Pte3g00194 236 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 28 165 IPR036873 -
Pte3g00194 236 Pfam Rhodanese-like domain 47 158 IPR001763 -
Pte3g00194 236 Gene3D - 31 201 IPR036873 -
Pte3g00194 236 CDD RHOD 51 153 - -
Pte3g00194 236 ProSiteProfiles Rhodanese domain profile. 45 168 IPR001763 -
Pte3g00194 236 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 1 235 IPR044664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00194 Pte-Chr3 1777506 1782039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00194 1 237 Sulfurtransferasese or Rhodanese AT4G24750 74.262 2.79e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00194 - - csin:114287994 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00194 3 1777506 1782039 Pte3g00194 3 1777506 1782039 RCT