Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00190 ATGGCTCTTCCTTCCTGCAAAATCCAACTATTTTGTCAATCTTTCATTTTCCTTTTCCTCTTCATCCATGCAAAACTCATCTTGGACCCTTCAGACCATAGAGCCCTCTTAGTTATCCGCAAAGACTTGGGAATTACTGGTCAACTCAACTCCTCCACCAACCCCTGCAACTCCCAAGGTGTGTTCTGCGAGAGGAGGTTTTCAATGGATAACAACTATGTTCTGAAGATCACCAGGCTTATCTTCAAGTCTCAACAGCTTGCTGGGTTTATATCACCTGCAATTGGACAGCTTTCCGAGCTCAAAGAGCTCTCTCTTTCTAAGAACAAACTCGTTGACCGGATTCCATCTAGAATCGTTGACTGCAAGAAACTGGAAATCCTAGACCTTGCAGATAATAGCTTTGTGGGTAAAATCCCATCTGACTTATCCTCTCTCACACGCCTTCGAGTTCTTGATGTATCTTCTAACAAGTTCTTTGGGGATTTGAATTTCTTGAAGCATTTTCCCAACTTGGAGCAGCTCTCTGTCGCAGATAATCTCTTCACAGGGAGAATTCCAAAATCTGTGCGCTCATTCCGAAATCTACGGTTCTTCAACTTCTCTTATAATCAGTTCCTTGAAGATTCGATGCCACTGATGAAGAGGGTTCAATACTCAGAGTCCGATGTTCCCAGACGTTATATTTTTGCTGAGAATAGAACTTCCATTAACAGAACTTCTGCAGCTGCACCAGCTGTAACCAAAAGATCCAGCGCTCAAGCTCCATCACCAGTAAAACAAATGCACAGACATAAAAACAGGAAGAAGAAAGTAATTGGTTTGATACTTGGTTTTATAGCTGGATCAGTAGCAGGGATTATATCAGGAATTACATTCTCTTTTCTGTTTAAGTTATGCTTAGCTGTTGTTAAAGGTGGAGGGAAAAAACAAGGACCTGCAATTTTCAGCCCTTTGATAAAGAAGGCTGAAGACTTGGCTTTCTTGGAAAAAGAGGATGGATTGGAATCAATGGAAATCATTGGAAGAGGGGGTTGTGGTGTAGTTTACAGAGCAGAACTCCCAGGAAGTAATGGAAAAATGATTGCCATCAAGAAGATTGTGCAGCCTACGATAGAAGCAGCAGAATTAGCTGAAGAAGATAGTAAGGTCCTGAACAAAAAAATGCGCCAAATCAGATCAGAAATAAACACAGTCGGTCAAATTCGCCATAGGAATCTTCTTCCTCTTCTAGCACATGTATCTCGACCTGATTGCCACTATCTTATCTATGAATACATGAAGAATGGAAGCTTACAAGATGCACTAAAACAAGTTGAAGATGGCACAAGGGAGCTAGATTGGTTGGCAAGGCACAAGATTGCAGTTGGGATAGCATCAGGACTTGAATATCTCCACATCAGTCACAGCCCACGTATCATTCACAGAGACCTCAAACCAGCAAATATCCTTCTAGGTGACGACATGGAAGCGCGTATTGCAGATTTTGGACTTGCAAAAGCCATGCCAGATGCTCACACACACATCACACTTTCAAATGTTGCTGGAACTGTGGGATACATAGCACCTGAGTACCACCAGGTATTGAAGTTCACAGAAAAATGTGACGTATATAGCTTTGGGGTCATTCTCGCTGTCTTGGTCATAGGAAAGGTTCCATCTGACGAGTTCTTCCAGCTCACGCAAGAGATGAGTTTGGTTAAGTGGATGAGAAATATAATAGCTTCCGAAAATCCTAAGCAAGCAATTAACCCAAAGCTCATGGGAAATGGGTATGAGGAGCAAATGCTTCTGGTGTTGAAAATCGCTTGCTTTTGCACTCTTGATGATCCAAAAGCGAGACCTAACAGCAAGGATGTTAGGTGCATGCTATCACAGATCAAGCATTAA 1890 0.4217 MALPSCKIQLFCQSFIFLFLFIHAKLILDPSDHRALLVIRKDLGITGQLNSSTNPCNSQGVFCERRFSMDNNYVLKITRLIFKSQQLAGFISPAIGQLSELKELSLSKNKLVDRIPSRIVDCKKLEILDLADNSFVGKIPSDLSSLTRLRVLDVSSNKFFGDLNFLKHFPNLEQLSVADNLFTGRIPKSVRSFRNLRFFNFSYNQFLEDSMPLMKRVQYSESDVPRRYIFAENRTSINRTSAAAPAVTKRSSAQAPSPVKQMHRHKNRKKKVIGLILGFIAGSVAGIISGITFSFLFKLCLAVVKGGGKKQGPAIFSPLIKKAEDLAFLEKEDGLESMEIIGRGGCGVVYRAELPGSNGKMIAIKKIVQPTIEAAELAEEDSKVLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLIYEYMKNGSLQDALKQVEDGTRELDWLARHKIAVGIASGLEYLHISHSPRIIHRDLKPANILLGDDMEARIADFGLAKAMPDAHTHITLSNVAGTVGYIAPEYHQVLKFTEKCDVYSFGVILAVLVIGKVPSDEFFQLTQEMSLVKWMRNIIASENPKQAINPKLMGNGYEEQMLLVLKIACFCTLDDPKARPNSKDVRCMLSQIKH* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00190 629 Coils Coil 375 395 - -
Pte3g00190 629 Gene3D Phosphorylase Kinase; domain 1 324 426 - -
Pte3g00190 629 ProSiteProfiles Protein kinase domain profile. 335 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00190 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 46 628 - -
Pte3g00190 629 MobiDBLite consensus disorder prediction 241 258 - -
Pte3g00190 629 SUPERFAMILY Protein kinase-like (PK-like) 328 624 IPR011009 -
Pte3g00190 629 Gene3D Ribonuclease Inhibitor 29 235 IPR032675 -
Pte3g00190 629 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Pte3g00190 629 SMART serkin_6 335 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00190 629 MobiDBLite consensus disorder prediction 241 264 - -
Pte3g00190 629 SUPERFAMILY L domain-like 31 209 - -
Pte3g00190 629 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 322 426 - -
Pte3g00190 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Pte3g00190 629 FunFam Leucine-rich repeat receptor-like protein kinase 427 629 - -
Pte3g00190 629 FunFam Leucine-rich repeat receptor protein kinase EMS1 71 166 - -
Pte3g00190 629 Pfam Protein kinase domain 336 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00190 629 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00190 Pte-Chr3 1761619 1763947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00190 1 630 Receptor kinase-like Gene Family AT2G31880 62.675 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pte3g00190 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00190 - - qsa:O6P43_022621 944.495