Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00172 ATGGGTTATGCTACCGTGTTCCAGCTCTTCTGTTTTCTGTTCTGTTACTTTAATGTGGGCATTTCTCAATTACAATCCTCTCAAATTGAAGTGCTTCTTCAGCTGAAAAAGCAGTTGGAGTATCCATGGCAAATGGAAACCTGGAACGATCATGGTACAGATTTTTGCTCTCTAACTTCGTTCGCATCACAGGTAAACGTTACATGCCAGGATAATGTTGTCACTGAGCTTTCCATAGTTGGTGATAGGCAAGTGACGATTAGAGAATTTAATGGATACGCAATAAAGAATCAAACTTTATCAGAAAGTTTCTCCATGGACTCATTTGTTTCTACACTGGCAAGATTAACTAGCTTGAAAGTGCTTCGCCTAGTGTCTTTAGGTATTTGGGGTTCACTTCCCGACAAAATTCACAGGCTGTCTATGCTTCAACATTTGGACTTGAGTTCCAATTTTCTCTTTGGTTCAGTTCCTCCCAAGATTTCTACGATGTTGAGTCTTCGAAATCTTACCTCGGATGATAATTTCTTCAATGGTACATTGCCTGATTGCTTCGATTCATTGACGAATTTGACAGTTCTGAGTCTGAGGAACAACCATTTAGAGGGTCCATTTCCATCTTCAATTACAAGCATCGACAGTCTCACTACCCTCGTTCTGTCTGGAAATGAGATTTCTGGAAGATTACCCGATTTCAGTGGTTTGAGAAATCTACAACTGATAGACTTGAGTGGAAACAGACTGCATTCCGAGCTTCCACCATTGCCGGGAGGATTGTTAATGGTTATTCTCAGAAACAACTCCTTCACAGAAGAAATTCCAAAACATTATGCGCAGATGAGTAGGCTTCAACATCTTGATGTGTCATTCAATGAGCTTACAGGCACACCTCCAGCCGAACTGTTCTCTTTGCCCAATATGAGCTACTTAAATTTAGCATCAAACTTGTTGAACGGTTCACTTTCAGGCCACATGAGCTGTAGCAGCAGACTTAAATTTGTTGATATATCAGACAATAAATTTAGAGGTAGTTTGTCTGATTGTTTAGGCACCAAGTCAGATAATAAAGTTGTTAAATTTGATGGCAATTGCTTGTCTACTAATAAACAGTATCAGCATCCAGTATCTTACTGCATGGAGGTTCACATGGAGAAAAAACAACCAAGAGTTGGAAGTTTGATAGGTTTTATGGTTGGAATCGTTGTCATAATAGTCCTTTTGGGTTTAGCATCTATTGTTTTATGTCAAAGATATTGCGCTAGAGGGATCTCAGAGCAGCATTTGCTGCAAAAAACAGTTCAAGATCAATCAGCACCAGGGTTCTCCTCAGAGCTTTTGAATAATGCAAGGTTTATCTACGAAGCTTCCAAGTTGAGAAAACAGGATGTCCCAATGTATCGGTCTTTTTCTTATGAAGAGTTGAAGGAAGCAACAACTAACTTCAACGACTCGGCATTGATGGGTGAAAGTTTATATGGGAAGGTATTTTCTATCACTGCTTTGCATGAATTTCATGAAACTTATAATTTTTTTTTTATATTTGCAAACTTTGAGTTGCAGCTGTATAGAGGAAAACTAGCAAATGGGACCCAAGTTGCTATCAGGTGCTTGCCTATGTCAAAAAAATATTCTCTTCGAAATTTTAAACTCAGATTGGATTTGCTTGCAAAGCTGCGCCACCCGCATTTGGTTTGTCTTTTGGGCCATTGCATTGAAGGTGTTGGCCTCGATGATCGTAGCGCAAGGAGCGTGTTTCTTATATCAGAATATGTGCCTAACGGAAGCTTCTGTACATATCTCTCTGGAGCTATTCCGGGAAAGGCATTTAACTGGTTAGAGAGGTTAACAGTTCTGATCAGCATTGCCAAGGCTGTGAATTTCCTGCACACTGGAGTGATCCCTGGTTTCTTCAACAACCGATTGAAGACAAATAATATCTTGCTAGATGAGCATGGAACAGCAAAGTTGAGTGACTACGGGCTGTCCATCATCTCAGAGGAAGCTGAAAAAAGCGGGGTGAGAGCTGAAAGCCTCAGATCACGGCAAATGACGAGGCTAGAAGACGACGTTTACAGCTTCGGTTTCATAGTATCGGAGGCACTTGTTGGACCATCTGTATCTGCTAGAATGGAACCATATTTGATCAAAGCATTGGCCTCTTTGAACAATGAGGAAGGTTGGAACCAGACTGTTGATCCAATCGTGTTAGCTACTAGCTGCCGAGAATCACTGTCTATTGTTATTTCCATTACAAAAAAAAGCATTTCTCCTGAATCATGGAGTCGACCATCTATCGAGGACGTCCTTTGGAACTTGCAGTATGCTGCACAAGTTCAGGCCACTGCTGATGGAGATCAGAGATTTGATTCTGCATCCCATTGA 2382 0.4081 MGYATVFQLFCFLFCYFNVGISQLQSSQIEVLLQLKKQLEYPWQMETWNDHGTDFCSLTSFASQVNVTCQDNVVTELSIVGDRQVTIREFNGYAIKNQTLSESFSMDSFVSTLARLTSLKVLRLVSLGIWGSLPDKIHRLSMLQHLDLSSNFLFGSVPPKISTMLSLRNLTSDDNFFNGTLPDCFDSLTNLTVLSLRNNHLEGPFPSSITSIDSLTTLVLSGNEISGRLPDFSGLRNLQLIDLSGNRLHSELPPLPGGLLMVILRNNSFTEEIPKHYAQMSRLQHLDVSFNELTGTPPAELFSLPNMSYLNLASNLLNGSLSGHMSCSSRLKFVDISDNKFRGSLSDCLGTKSDNKVVKFDGNCLSTNKQYQHPVSYCMEVHMEKKQPRVGSLIGFMVGIVVIIVLLGLASIVLCQRYCARGISEQHLLQKTVQDQSAPGFSSELLNNARFIYEASKLRKQDVPMYRSFSYEELKEATTNFNDSALMGESLYGKVFSITALHEFHETYNFFFIFANFELQLYRGKLANGTQVAIRCLPMSKKYSLRNFKLRLDLLAKLRHPHLVCLLGHCIEGVGLDDRSARSVFLISEYVPNGSFCTYLSGAIPGKAFNWLERLTVLISIAKAVNFLHTGVIPGFFNNRLKTNNILLDEHGTAKLSDYGLSIISEEAEKSGVRAESLRSRQMTRLEDDVYSFGFIVSEALVGPSVSARMEPYLIKALASLNNEEGWNQTVDPIVLATSCRESLSIVISITKKSISPESWSRPSIEDVLWNLQYAAQVQATADGDQRFDSASH* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00172 793 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 367 - -
Pte3g00172 793 SUPERFAMILY L domain-like 54 367 - -
Pte3g00172 793 SUPERFAMILY Protein kinase-like (PK-like) 463 772 IPR011009 -
Pte3g00172 793 ProSiteProfiles Protein kinase domain profile. 481 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00172 793 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Pte3g00172 793 Pfam Leucine rich repeat 262 317 IPR001611 GO:0005515
Pte3g00172 793 ProSiteProfiles Leucine-rich repeat profile. 214 236 IPR001611 GO:0005515
Pte3g00172 793 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 25 257 - -
Pte3g00172 793 Gene3D Phosphorylase Kinase; domain 1 452 576 - -
Pte3g00172 793 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 591 791 - -
Pte3g00172 793 Gene3D Transferase(Phosphotransferase) domain 1 591 791 - -
Pte3g00172 793 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 383 - -
Pte3g00172 793 SMART LRR_typ_2 235 258 IPR003591 -
Pte3g00172 793 SMART LRR_typ_2 280 304 IPR003591 -
Pte3g00172 793 SMART LRR_typ_2 140 164 IPR003591 -
Pte3g00172 793 SMART LRR_typ_2 188 222 IPR003591 -
Pte3g00172 793 Pfam Protein tyrosine and serine/threonine kinase 526 705 IPR001245 GO:0004672|GO:0006468
Pte3g00172 793 Gene3D Ribonuclease Inhibitor 260 387 IPR032675 -
Pte3g00172 793 Gene3D Ribonuclease Inhibitor 25 259 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00172 Pte-Chr3 1624821 1629059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00172 1 720 Miscellaneous Gene Families AT5G14210 47.945 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pte3g00172 PK_Tyr_Ser-Thr 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00172 - - qsa:O6P43_022568 980.704