Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00170 ATGGTTTCAACGAGACGGAGTGGATCTCTCTCCGGCAACAATACCAAAAGATCGTCTTCTTCTGAGGACAAACCTCCCTCACCCAAACGCCAAAAGGTCGAATATGGCGGGTCGCCGGATAAACCGATGCCGGCGGTAGAGAATTCTAAACAAGTGTACTCCCCCGAGCCGCCGGCTGATCCTGGAGAATGTGGTTCCACAGATGCAAATGTCGCTGCAAACGCAGGGCAAGCTGATGCTCTGCCTGCTTTGGCTGTGGCACCTCCGATCGCTGATGGTTCCTCCCCTACTTTGGTTGTTGACAAGCCGAGGAGTTCGTTTTCTTCGTGGAGTATATATCAGAAGCAAAACCAGAGTTTTGACTCGACAAATCCATGGTGCAAGCTTCTAGCACAATCTGGGCAGAATCCCAATGTTCCCATTTGCACGCCGAACTTTACGATTGGCTCCAATAAAACCTGCAACTTTCAAGTGAAGGATCAAATTGTCAGTACAACCCTCTGCAAGATAAGGCATACTCAGCGCGAGGGGAGTACTGTGGCTGTGCTAGAAAGTACGGGCAGTAAAGGACTTGTGCTTGTGAACGGAACACCTGTTAAGAAGAATACAAGCTGCATGCTTAACTCTGGTGATGAGGTCACTTTTGGCGTGCTGGGGAACCATGCTTACATTTTTCAGCAACTCAATAACGAGGTTGCAATGAAGGGAGTAGAAGTTCAGAATGGAGTTGGGAAGTTTCTGCATCCTGAAAGAAGAGCAGGAGATCCTTCAGCTGTGGCTGGTGCATCCATTTTGGCATCCCTTTCTACCAGTCTTACTCCATGGAAGACCCCATCCCAGAATATTAGCAAAATTCAACAGAGTGCTGATGTTCCTAGTAATTCTGATATTCAAGATGGTGCAGAAATTGTGCTTGATGGCCCTGATGGAAATCTAATTCTAAACACCGCAAGTGAGAAGGTATCTGATGTAGGAACAGATGGCAGAAGTTCTCCTGTGGATTGCGTCCCAGAAGCTGATATAGAGGCAGGCAATGTAATGGAAGAAAGAAATGGAACAAGGGCTCTGCAGCCAACGTCAACATCAGGCATGTCTCTGCGTTGTTTGGTGTTTAAAGAAGATGTCAATGCTGCAATTCTTGATGGCAGGAAAATAGAAGTTTCTTTTGATAATTTTCCCTACTATTTGAGCGAAAATACAAAAAATGTTCTCATTGCAGCTTCATTTATACACTTGAAGCACAAAGAGCATGCAAAGTATACCTTGGAGCTTACTACTATAAATCCACGTATTTTGCTTTCTGGTCCTGCAGGTACTTCTATATATCAGGAAATGTTGGCAAAAGCACTAGCTAATCACTTTGGGGCTAAGTTGCTCATATTTGATAGCCATTCATTTTTGGGTGGTTTATCATCCAAGGAAGCAGAGTTGCTCAAAGATGGATTTGGTGCTGAAAAGTTTTGCAGTTTTGCTAAACAAAGTGTTGTGCCCTCAGACTTGCGGCTGGGAACCAACCCTGCAGCTAGCGAGCCAGACCCTCCTAGCTCTTTGAATTTACCTTCTTCATATGATCTAGAATCTCAACCTAAGCTAGAGACTGATACAATGCCTGCTTCCTCTGCAACTAATAAGAATGCCTTATTCAAACTTGGTGATAGAGTAAAATTCACTGGTTCATCGACCGGTGGCTTATTTTCAGCATCATCTTCAAGAGGCCCACCTAATGGCAGTCGTGGGAAAGTTGTCTTACTTTTCGATGACAATCCTTTGTCAAAAGTTGGGGTTAGATTCGATAAGCCTGTTCCTGATGGAGTTGATCTTGGTGGACTATGTGAGGCGGGCTATGGATACTTCTGTAATGTTAGTGACCTCCGTTTGGAAAATAATGGTGTGGAAGAATTGGACAAGTTACTAATTAACACATTGTTTGAGGTTATACACAGTAAGAGCAGAAGGGCACCTTTTATATTGTTCATGAAGGACTCTGAGAAGTCTATTGTGGGAAATGGGGATTCTTATTCTACATTTAAAAACAAACTTGAAAAGCTTCCTGATAATGTGGTGGTTATTGGTTCCTACACTCATACAGAGAGTTGGAAAGAGAAGTCACATCCTGGTGGTCTGCTTTTCACAAAGTTTGGCAGCAATCAAACTGCTCTTCTTGATTTAGCTTTCCCTGATAATTTTGGAAGATTGCATGATAGGGGCAAGGAAGTACCTAAGGCAACAAAACTTCTAACTAAGCTTTTCCCCAATAAAATTACCATTCACATGCCACAGGAAGAGGCACTTTTAGCTTCATGGAAGCAACAATTAGATCGGGATGCTGAAACCATCAAGATGAAAGCAAACCTGTATAACTTACATACGGTTTTGGCTCGCTATGGGATTGAATGTGAAGGACTTGAAACTTTGTGCATTAAGGATCAGACGTTGACAAATGAAAGTGCAGAGAAGATAGTTGGATGGGCTTTAAGCCATCACTTGATGCAAAATCCTGGAGCTGATCCTGATACTAGGCTTGTCTTGTCTTGTGAAAGCATCCAGTATGGAATCGGAATCCTACAGGCTATTCAGAATGAAACTAAGAGCTTGAAGAAGTCTCTGAAGGATGTCGTGACAGAAAATGAGTTTGAGAAGCGACTCCTAGCTGACGTAATCCCTCCCAATGACATTGGTGTTACTTTTGATGACATTGGGGCTCTTGAAAATGTGAAAGACACCCTAAAGGAATTGGTCATGCTCCCCTTACAGAGGCCTGAACTATTCTGCAAAGGTCAACTGACCAAGCCTTGCAAGGGTATCTTATTATTTGGCCCCCCTGGAACTGGAAAGACCATGCTTGCTAAAGCTGTTGCGACTGAAGCTGGTGCGAACTTCATCAACATTTCTATGTCTAGTATCACATCAAAGTGGTTTGGTGAGGGGGAAAAATATGTGAAAGCAGTTTTTTCCCTTGCCAGTAAAATTGCTCCAAGTGTTGTATTTGTGGACGAAGTAGACAGCATGCTTGGTAGGAGGGAGAATCCCGGTGAGCATGAGGCCATGCGCAAAATGAAAAATGAGTTCATGGCCAACTGGGATGGCTTACGCACAAAAGATACAGAAAGAGTTCTTGTGCTTGCAGCTACAAACAGGCCTTATGATCTTGATGAGGCTGTCATTCGTAGGCTACCTCGCAGGTTGATGGTGAACTTGCCTGATGCTCCAAATAGAGCAAAAATATTAAAAGTTATACTGGCAAAAGAGGACTTGTGCCCTGATTTTGATCTTGATACAATTGCAAATATGACTGATGGGTACTCTGGAAGTGACCTTAAGAATCTATGCGTCACAGCTGCGCACCGTCCAATCAAAGAGATATTGGAAAGAGAGAAGGAGGAGCGTGCCACTGCTTTAGCAGAAGGTAAACCATCGCCCGCTTTAAGTGGCAGTGCCGACATTCGACCACTGAACATGGAAGACTTCAAATATGCTCATGAACGGGTTTGTGCTAGCGTCTCCTCTGAATCTGTAAATATGACCGAACTTCTGCAATGGAATGAACTTTATGGTGAAGGAGGTTCTAGAAGAAAGAAGGCTCTTAGCTACTTCATGTGA 3600 0.4372 MVSTRRSGSLSGNNTKRSSSSEDKPPSPKRQKVEYGGSPDKPMPAVENSKQVYSPEPPADPGECGSTDANVAANAGQADALPALAVAPPIADGSSPTLVVDKPRSSFSSWSIYQKQNQSFDSTNPWCKLLAQSGQNPNVPICTPNFTIGSNKTCNFQVKDQIVSTTLCKIRHTQREGSTVAVLESTGSKGLVLVNGTPVKKNTSCMLNSGDEVTFGVLGNHAYIFQQLNNEVAMKGVEVQNGVGKFLHPERRAGDPSAVAGASILASLSTSLTPWKTPSQNISKIQQSADVPSNSDIQDGAEIVLDGPDGNLILNTASEKVSDVGTDGRSSPVDCVPEADIEAGNVMEERNGTRALQPTSTSGMSLRCLVFKEDVNAAILDGRKIEVSFDNFPYYLSENTKNVLIAASFIHLKHKEHAKYTLELTTINPRILLSGPAGTSIYQEMLAKALANHFGAKLLIFDSHSFLGGLSSKEAELLKDGFGAEKFCSFAKQSVVPSDLRLGTNPAASEPDPPSSLNLPSSYDLESQPKLETDTMPASSATNKNALFKLGDRVKFTGSSTGGLFSASSSRGPPNGSRGKVVLLFDDNPLSKVGVRFDKPVPDGVDLGGLCEAGYGYFCNVSDLRLENNGVEELDKLLINTLFEVIHSKSRRAPFILFMKDSEKSIVGNGDSYSTFKNKLEKLPDNVVVIGSYTHTESWKEKSHPGGLLFTKFGSNQTALLDLAFPDNFGRLHDRGKEVPKATKLLTKLFPNKITIHMPQEEALLASWKQQLDRDAETIKMKANLYNLHTVLARYGIECEGLETLCIKDQTLTNESAEKIVGWALSHHLMQNPGADPDTRLVLSCESIQYGIGILQAIQNETKSLKKSLKDVVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMANWDGLRTKDTERVLVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLCPDFDLDTIANMTDGYSGSDLKNLCVTAAHRPIKEILEREKEERATALAEGKPSPALSGSADIRPLNMEDFKYAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00170 1199 MobiDBLite consensus disorder prediction 1 69 - -
Pte3g00170 1199 Pfam AAA+ lid domain 1088 1123 IPR041569 -
Pte3g00170 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1175 IPR027417 -
Pte3g00170 1199 MobiDBLite consensus disorder prediction 509 538 - -
Pte3g00170 1199 Gene3D - 1067 1161 - -
Pte3g00170 1199 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 371 1198 - -
Pte3g00170 1199 ProSitePatterns AAA-protein family signature. 1038 1057 IPR003960 GO:0005524|GO:0016887
Pte3g00170 1199 MobiDBLite consensus disorder prediction 22 36 - -
Pte3g00170 1199 Pfam FHA domain 147 216 IPR000253 GO:0005515
Pte3g00170 1199 MobiDBLite consensus disorder prediction 501 538 - -
Pte3g00170 1199 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g00170 1199 SUPERFAMILY SMAD/FHA domain 103 222 IPR008984 GO:0005515
Pte3g00170 1199 Coils Coil 855 875 - -
Pte3g00170 1199 SMART AAA_5 931 1068 IPR003593 GO:0016887
Pte3g00170 1199 Pfam ATPase family associated with various cellular activities (AAA) 935 1064 IPR003959 GO:0005524|GO:0016887
Pte3g00170 1199 Gene3D - 125 234 - -
Pte3g00170 1199 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 893 1069 - -
Pte3g00170 1199 Gene3D - 893 1174 IPR027417 -
Pte3g00170 1199 Gene3D - 530 631 IPR047008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00170 Pte-Chr3 1598960 1607686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00170 894 1146 Calmodulin-binding Proteins AT3G56690 38.462 8.67e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00170 - - qsa:O6P43_022558 1827.37