Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00164 ATGGCGGCTCTGCAACAATCTCTAACCTCAGTCCAGTCCAAATACATTGCGTCTTTGCAAATCCCAAGAGGCTTCCTTACCCATAAACCATTCCTCAACCTATCTTTCTCTGCCTCCACCTGTACTTCTATCCAACTCAAGCTCACGGGGACTTCCACTAGCCGCCGACACCTTGTCTCTGTCAGAGCAGCCGGGTCCGGCGGTGCCGCTACCAACTACGCCGCTGCCCTCGCTGATATTGCCAAAACCAACAATTCCCTGGACGACACCCTCGCTGACGTTGAGAAAATCGAGAAAATATTGAGCGACCAAGGGGTGTATAACTTTTTTACCAACCCAATTATCGGTACAGACAAGAAAAGCAGTTTACTCAGTGAAATTATCAATGCGTCGAGCCTCCAACCACACACTGCTAATTTCCTCAATCTCTTGCTCGATTCCGGGAGGATCGGTTTGATTAATGAAATTGTGGAGGAATTTGAGGTTGTGTATAACGAATTGACGAATACAGAGCTAGCTGTTGTGAGCTCTGTGGTGAAGCTAGAGTCTCAGCAATTAGCTCAGATTGCCAAGCAAGTGCAGAAGCTGACAGGGGCCAAGAACGTCAGGATCAAAACGGTGATAGACCCCAGTTTGATTGCCGGGTTCACGATTAGGTATGGGAACACAGGATCCAGGTTAATTGACATGAGTGTCAAGAAGCAACTTGAAGAAGTCGCCAGCCAACTCGATTTGGATGACATTACAATTCCTATAAGTCAGAAGGCTCAGAATTCCTTTGTGTAG 786 0.4733 MAALQQSLTSVQSKYIASLQIPRGFLTHKPFLNLSFSASTCTSIQLKLTGTSTSRRHLVSVRAAGSGGAATNYAAALADIAKTNNSLDDTLADVEKIEKILSDQGVYNFFTNPIIGTDKKSSLLSEIINASSLQPHTANFLNLLLDSGRIGLINEIVEEFEVVYNELTNTELAVVSSVVKLESQQLAQIAKQVQKLTGAKNVRIKTVIDPSLIAGFTIRYGNTGSRLIDMSVKKQLEEVASQLDLDDITIPISQKAQNSFV* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00164 261 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 202 221 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pte3g00164 261 Pfam ATP synthase delta (OSCP) subunit 70 243 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 Gene3D - 68 162 IPR026015 -
Pte3g00164 261 Hamap ATP synthase subunit delta [atpD]. 65 245 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 69 169 IPR026015 -
Pte3g00164 261 PRINTS ATP synthase delta subunit signature 69 88 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 PRINTS ATP synthase delta subunit signature 138 149 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 PRINTS ATP synthase delta subunit signature 149 163 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 PRINTS ATP synthase delta subunit signature 200 215 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 PRINTS ATP synthase delta subunit signature 218 236 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 PANTHER ATP SYNTHASE DELTA CHAIN 56 244 IPR000711 GO:0015986|GO:0046933
Pte3g00164 261 NCBIfam ATP synthase F1 subunit delta 70 243 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00164 Pte-Chr3 1566798 1568493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00164 1 250 Primary Pumps ATPases AT4G09650 54.183 1.60e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00164 K02113 - qsa:O6P43_030724 312.768