Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00120 ATGGCAACTCAATCTGAACGCCTTGGCTATGAATTCGCCAGATGGTTAGGAGTCCGAACTCCACAAGCAAGAGTCATTCATTATACTAGTCAAGAGTGGCAGCAAATAAAGGTAGCTGCAGAGAAAGCTAGAGAAGCAGCTAACGTAGAGGGCGATGAAGTTGGTGAAATGACATGCTCAGAACTTTTGGAAGCACTTGAGCTTAGTCGATGTCTCTTTTTCATGAGTTATGTGCATGGTTCGCCTTTACTTGAAAACTCAAGTGCTTTTGAGACTCAGGAATATGCAGAAAGAACGTCAGCTGCACTTGGTAGGGTTTTGATGCTGGACCTTGTCATTAGAAACGAAGATAGGCTACATTGCAATGAGCTTAGATGGCGAGGAAATTCCGCAAACTTGTTGTTGGCTGACAAACTGGTCACGACAGACATGGATGCAGAGGAAAGAGCTTTTGACTCTGCAATCACTCGTTATAGACCAAAAGTGATTAGAGCTTTTCAGAAGGAAAGAAGGGCAACTTCAGTTGATTGTAGAATGAGCACTAATTCAGGATTGGTATCTCAAAGTTCTGATCTTTCTGACATTACAGAATCACCCAGGTCTAGTGACTTGAGCCTTTTAAGCCAAGCCTCTGACGACTTCTCAGCTGCTGACTTTTACATTGTCGCCATTGATTCTTGTGTTCCTCGTCGTCCCCCTGCTGGAAAACGTGCAAATGATCAGGCCAATTATCCAAAGTTAGTTGAGTTACTACTCAACAGTTCTGAGTTTTCATCAAAAGTCTTGTATGAAATAACCAGTGGAAAACTAGGATCACCTCCACCCGAAGAAACCAACTCAACAAATCTACTAGCCGGTGAAATGTCTTCAGTTGTTCGTTTATTCCGTAGAGGTTTTCGTGCTGCCCTCAGGGATTTGCAGGGGTTTCATATATTCCTACTCACGCTCCATCAGAGACTTGATAACCTGCTACGAGTATTTCTGAATATAATGAGTCGATTAACTGGAGAGTCTGACAAAGAGGATCCTGCAGTTGCTGAGTCACCGGATGTTAGTGATTCAGAACCACAGAGGACTCTTCAGAAATCGTCTTCATTGTCGTCCTCTGGAAATAAAGAAAGCTTAGACTACAGTTCTTCCAATTCACGAGAAGGTTGCCATGGAAAGTTTTATAGAGGAGGAGGGGAGACCCTCCGTAGCCTACGGTTGACAGCAAAGCTCCGTGACTTCAATAAATTTGCCAAGGTTGATGCTGAATCTAGTAAAGAATTAGAGCAGTGGAATGAAATGCTAAAAAGTGAAGCCATCAAACTTTGTCAGGAGAACAATTTCAATTGTGGATTTTTTGAGGGAAGTGATAATAATGGCGTTGTTGATGCTTATGAACTTAAGGTCAGACTTGAGCACATTCTCGAGAGGATTGCATTGATATCGGAGGCTGCAAGCACAGAAAAGCCATCTTTAGTCATTAACCATATGTTCATTGGTGGAGCACTAGCTGCAAGGTCTGTTTACACACTGCAACATTTGGGGATCACTCATGTACTATGCTTGTGTTCCAACGAGATTGGACAGTCAGATTCTCAATTTCCTGACCTCTTTGTTTACAAAAATTTTTCAGTTAGTGACAATGAAGACACTAATATAAGCAGCATCTTCGAAGAAGGATGCGATTTCATTGATAGTGTGGAACAACTTAATGGGAGGGTCTTGGTTCACTGCTTCGAAGGAAAAAGCAGAAGTGCGGCATTGGTACTTGCTTACCTTATGCTGAGAAAGGCTTTCACTCTGTTAGAAGCTTGGTTGACACTGAAACGAGCTCACAGAAGAGCACAACCCAATGATGGATTTGCAAAAGTATTAATCGAATTGGATAAAAAATTGCATGGGAAGGTGTCGATGGAGTGGCAACAGAGGAAGCCTATGATGAAAGTTTGCCCCATCTGTGGGGAAAATGCCGGTCTGAGCAGCAGCTCTCTTAAGCTACATGTGCAGAAGGCGCATAAGAAGTTATCGTCAGGTAGTGTAGATAGTGCTATGACAATGGAGATACAGAAGGCTATAGCTGCTCTCAAAGTGAATCGAGGTGGCAGTGTAAGCCCAACACAGAGACAGTCTTTAGTGGATGAATGA 2133 0.4285 MATQSERLGYEFARWLGVRTPQARVIHYTSQEWQQIKVAAEKAREAANVEGDEVGEMTCSELLEALELSRCLFFMSYVHGSPLLENSSAFETQEYAERTSAALGRVLMLDLVIRNEDRLHCNELRWRGNSANLLLADKLVTTDMDAEERAFDSAITRYRPKVIRAFQKERRATSVDCRMSTNSGLVSQSSDLSDITESPRSSDLSLLSQASDDFSAADFYIVAIDSCVPRRPPAGKRANDQANYPKLVELLLNSSEFSSKVLYEITSGKLGSPPPEETNSTNLLAGEMSSVVRLFRRGFRAALRDLQGFHIFLLTLHQRLDNLLRVFLNIMSRLTGESDKEDPAVAESPDVSDSEPQRTLQKSSSLSSSGNKESLDYSSSNSREGCHGKFYRGGGETLRSLRLTAKLRDFNKFAKVDAESSKELEQWNEMLKSEAIKLCQENNFNCGFFEGSDNNGVVDAYELKVRLEHILERIALISEAASTEKPSLVINHMFIGGALAARSVYTLQHLGITHVLCLCSNEIGQSDSQFPDLFVYKNFSVSDNEDTNISSIFEEGCDFIDSVEQLNGRVLVHCFEGKSRSAALVLAYLMLRKAFTLLEAWLTLKRAHRRAQPNDGFAKVLIELDKKLHGKVSMEWQQRKPMMKVCPICGENAGLSSSSLKLHVQKAHKKLSSGSVDSAMTMEIQKAIAALKVNRGGSVSPTQRQSLVDE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00120 710 ProSitePatterns Tyrosine specific protein phosphatases active site. 572 582 IPR016130 GO:0016311|GO:0016791
Pte3g00120 710 Pfam Dual specificity phosphatase, catalytic domain 504 626 IPR000340 GO:0008138|GO:0016311
Pte3g00120 710 Gene3D - 82 205 IPR036940 -
Pte3g00120 710 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 485 630 IPR029021 -
Pte3g00120 710 MobiDBLite consensus disorder prediction 338 382 - -
Pte3g00120 710 SUPERFAMILY Protein kinase-like (PK-like) 1 241 IPR011009 -
Pte3g00120 710 Gene3D Protein tyrosine phosphatase superfamily 468 640 IPR029021 -
Pte3g00120 710 CDD DSP 486 623 - -
Pte3g00120 710 Pfam Actin-fragmin kinase, catalytic 3 216 IPR015275 -
Pte3g00120 710 ProSiteProfiles Dual specificity protein phosphatase domain profile. 485 630 IPR020422 GO:0006470|GO:0008138
Pte3g00120 710 SMART dsp_5 485 627 IPR020422 GO:0006470|GO:0008138
Pte3g00120 710 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 557 606 IPR000387 GO:0016311|GO:0016791
Pte3g00120 710 MobiDBLite consensus disorder prediction 352 382 - -
Pte3g00120 710 FunFam Dual specificity protein phosphatase PHS1 457 631 - -
Pte3g00120 710 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 708 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00120 Pte-Chr3 1173691 1177911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00120 1 696 Protein tyrosine phosphatase (PTP) family AT5G23720 64.423 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00120 K14165 - jre:109000311 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00120 3 1173691 1177911 Pte3g00120 3 1173691 1177911 RCT