Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00119 ATGGCAACATCAGAAGCATGCGCCAAAGGAAACCGTGTGAACGGCAAAGGGGATAGTGCCTCGTCTCGTTACATCAACCAGAGCGGTGCTAGTAATTGTGCGGAGAAGCTTAAAGGACAACCGTCATCTTATCCTGATGCAGAATCGGCACTTTACAGGGAGTTATGGCATGCCTGTGCCGGTCCTCTAGTCACTGTACCTCGTAAAGGAGAACTCGTATTCTATTTCCCTCAAGGACATATAGAGCAGGTAGAGGCATCGACCAATCAAGTAGCTGACCAGCAGATGCCTGTATATAATCTTCCATCAAAAATCCTTTGTCGGGTTATCAACGTTGATTTGAGGGCCGAACCAGATACGGATGAGTTGTATGCTCAGATCATTTTGCTTCCCGTCGAAAATCAAGATGAGACTGCTAAGGAAGAATCCCCCCCACCACCACCTCGCTTTCAAGTGCATTCTTTTTGTAAGACCCTAACTGCTTCAGATACAAGCACTCACGGTGGGTTCTCTGTTCTAAGAAGGCATGCAGATGAATGTCTCCCTCCACTCGACATGTCAAAGCAGCCGCCTACACAGGAGTTGGTAGCCAAAGATCTGCATGGAAATGAGTGGCGGTTTAGACATATTTTCAGAGGTCAACCGCGAAGACATTTATTGCAAAGTGGGTGGAGTGTCTTTGTCAGCTCAAAGAGACTTGTTGCTGGCGATGCATTCATATTTCTCAGAGGGGAAAATGGGGAGCTTCGTGTTGGTGTAAGGCGTGCAATGCGTCAGCAGGGTAACATACCATCATCTGTGATATCTACTCACAGTATGCATCTTGGAGTCCTTGCAACTGCTTGGCATGCGGTTTCGACAAAAACCATTTTCACAGTCTATTACAAGCCTAGGACTAGCCCTGCTGAGTTCATTGTCCCATTCGACCAGTACATGGAGTCTCTGAAGAACAGCTACACTGTTGGGATGAGGTTCAAAATGAGTTTTGAAGGTGAGGAAGCTCCAGAGCAGAGGTTTATTGGTACTGTAGTTGGAATTGAAGATGCTGACACTAGGAGGTGGCCAGATTCCAAATGGAGATGCCTCAAGGTAAGATGGGATGAAGCATCTTCATTACCACGACCTGATAGAGTGTCGCTTTGGAAAATTGAACCCGCACTTGCTCCTCCTACCTTTAATCCCCTTGCAATGCCTAGGCGTAAAAGGCAACGAGCGAATATGATTCCTTCATCCACTGACTCCTCTATTCTTACTAGAGAAGGTTCATCTAGAGTAACTGTGGTGCATTCACCAGCTAGCGGATTTTCAAGGGTCTTGCAAGGTCAAGAATTCACGACTTGGAGAGGGAACCTTGCTGAAAGTAACGAGTCTGACGCAGCAGAAAAGTCTGTTGCATGGTCACCTGCTTTAGATGACCAAAAGATGGATGTCGTTTCAGCTTCGAGAAGATATGTGCCGGAAAATCAGATGTCCATGGGGACGCATGAGCCCATTTACTTAGACATGCTATCTGGCTTTGGTTCCAATTCGGATACTTCCAAGGCTGATACTTCTCACAATATTGTTCCATCCTCAGTTGATCAAACTACTAGTCCAGCGATAAAACATGCAATCGAGGATGACAGGTTTGCCAATTCGTGGCCTTTAATGCGTTGTACTCTTTCACTTAATTTGGGTTCAAACCTAAAAGGTTCACCTCAAGGTACTGATATACATTATCAAGCTGGAAGCAACGTTAGAGTTAATGCATTTGGCGAGTACACTGCATTTCATGGACATAGAATTGAGCTTCAAAATGGAAACTGCCTCATGCCTTGTCCTCCTCCAACTCAATTTGAAGGTTCCTCAATGCGAGAATCAGTTCCAAAGCTTGTTTCCTGTAATTCATTTGAATGTGCAAAACCAAGAGATGGGAACTCTAAACTCTTTGGTATATTACACCGATCCATGTATGAATCTGATCAGATCTCGGAGCAGTTAAGGAGTGGGAAGGAAACTAAGGTTTTAGCTGATATAAATGAAAGGGAGAAATCGTTACAGAGTTATCAGCAAAATTCAAAAGATGCTCAAGCTAAACCGGCTGGTGGTTCAACTAGGAGTTGCACAAAGGTTCACAAAAAGGGGATTGCACTTGGTAGGTCTGTGGACCTCACAAAATTCAACAACTATGATGAACTGATCGTAGAATTAGACCAGTTGTTTGGATTTGGAGGTGAATTGATGTCTCCCAAAAAGGATTGGCTTATTGTCTACACTGACAATGAGGGTGATATGATGCTTGTTGGAGATGACCCTTGGCAGGAATTTTGTGCCATGGTTCGCAAAATCTTTATCTATCCCAATGAAGAGTTTCAGACCATGAGCCCAGGGGTGTTAAATTCAAAGGGTGAAGAGAACACTGGTAGCGATGTCAGAGACATAAAAAGTCAGCCTCTTCATCCAGTTCCTGCTCCTGAGTGTTCTTAG 2466 0.4465 MATSEACAKGNRVNGKGDSASSRYINQSGASNCAEKLKGQPSSYPDAESALYRELWHACAGPLVTVPRKGELVFYFPQGHIEQVEASTNQVADQQMPVYNLPSKILCRVINVDLRAEPDTDELYAQIILLPVENQDETAKEESPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNIPSSVISTHSMHLGVLATAWHAVSTKTIFTVYYKPRTSPAEFIVPFDQYMESLKNSYTVGMRFKMSFEGEEAPEQRFIGTVVGIEDADTRRWPDSKWRCLKVRWDEASSLPRPDRVSLWKIEPALAPPTFNPLAMPRRKRQRANMIPSSTDSSILTREGSSRVTVVHSPASGFSRVLQGQEFTTWRGNLAESNESDAAEKSVAWSPALDDQKMDVVSASRRYVPENQMSMGTHEPIYLDMLSGFGSNSDTSKADTSHNIVPSSVDQTTSPAIKHAIEDDRFANSWPLMRCTLSLNLGSNLKGSPQGTDIHYQAGSNVRVNAFGEYTAFHGHRIELQNGNCLMPCPPPTQFEGSSMRESVPKLVSCNSFECAKPRDGNSKLFGILHRSMYESDQISEQLRSGKETKVLADINEREKSLQSYQQNSKDAQAKPAGGSTRSCTKVHKKGIALGRSVDLTKFNNYDELIVELDQLFGFGGELMSPKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIFIYPNEEFQTMSPGVLNSKGEENTGSDVRDIKSQPLHPVPAPECS* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00119 821 FunFam Auxin response factor 153 257 - -
Pte3g00119 821 SUPERFAMILY CAD & PB1 domains 699 776 - -
Pte3g00119 821 Coils Coil 672 692 - -
Pte3g00119 821 Gene3D - 318 388 - -
Pte3g00119 821 Gene3D - 152 257 IPR015300 -
Pte3g00119 821 SMART B3_2 155 257 IPR003340 GO:0003677
Pte3g00119 821 Pfam Auxin response factor 281 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte3g00119 821 Pfam AUX/IAA family 745 785 IPR033389 -
Pte3g00119 821 Pfam AUX/IAA family 682 734 IPR033389 -
Pte3g00119 821 Pfam B3 DNA binding domain 155 256 IPR003340 GO:0003677
Pte3g00119 821 FunFam Auxin response factor 695 788 - -
Pte3g00119 821 MobiDBLite consensus disorder prediction 679 701 - -
Pte3g00119 821 FunFam Auxin response factor 318 390 - -
Pte3g00119 821 MobiDBLite consensus disorder prediction 405 422 - -
Pte3g00119 821 ProSiteProfiles PB1 domain profile. 699 781 IPR000270 GO:0005515
Pte3g00119 821 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g00119 821 CDD B3_DNA 153 255 IPR003340 GO:0003677
Pte3g00119 821 MobiDBLite consensus disorder prediction 789 821 - -
Pte3g00119 821 MobiDBLite consensus disorder prediction 398 422 - -
Pte3g00119 821 ProSiteProfiles B3 DNA-binding domain profile. 155 257 IPR003340 GO:0003677
Pte3g00119 821 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 788 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte3g00119 821 Gene3D - 695 788 - -
Pte3g00119 821 MobiDBLite consensus disorder prediction 679 697 - -
Pte3g00119 821 SUPERFAMILY DNA-binding pseudobarrel domain 151 284 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00119 Pte-Chr3 1167902 1173320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00119 1 809 B3 DNA Binding Superfamily AT5G62000 60.930 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte3g00119 B3 1.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00119 - - qsa:O6P43_023511 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00119 3 1167902 1173320 Pte3g00119 3 1167902 1173320 RCT