Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00096 ATGGCCTCTTCTTCTGATCAGGAAACTTCCCAAAACAACAAAAACAACAGCAATAGAAGAAACCCCATATCAGAAAAATCGTTAATTGTATTTAGGGAACGAGATGTAGAAGACAACTGGCTGGAGCTAGGGTTAGGATTTAGTAAAGTTTGCGAGAAAAATGAAGGTCACGGCTTAAAACCGCAGTCGGTTCCCTCAGATTCATCCAGGTCTTGCAATTCTTTAGCATTACAAGTACAAAACTCCCCGTCAGTAAATTTAGGAAGATGTTCAACTTTAGGGTCTGACCTGAGTTTTAGACGTGTGGTGGGTGCAGTTGATCAGCTCCATCATTATCAACATAGCTTGTTGAGGCGGCCAAGTCATAGTCCTCATTATGATTATGATAATGGCATGGCCTTATGTCCATCATCATCATCATTGCATATGGATTCTGCTCGCTGTAATTCTCATCATCACTCCACAACAAATCCTTATTATCAGCTTGGTTTGTGGTTTACTCTTCGTTCCTCTGCCAACCGGAACGGAGAAGCTTTGCCTCAAATTCCTAAGGCTTATATTAGGGTAAAAGACGAGAACGTGACTATTCTCACGGTAAAAAGGTACTTAGTTGCAAAGCTTGGTCTCTCCAACGAAGCTGAGATCGACATACTATGCAGTGGACAAAGCTTGCCCCATTTGCGAACCTTGAAACAGGTAAGAGATACTTTGTGGCTACCTAGACTTGTAGAATCTTCGAATTCCACCTCGATATCAGTTGAAGACCTGCGGGGTACAAGTACACCCCACTTGATGTCATTGCATTATCAGAGGCAGTGCATCTTAAATTAA 831 0.4212 MASSSDQETSQNNKNNSNRRNPISEKSLIVFRERDVEDNWLELGLGFSKVCEKNEGHGLKPQSVPSDSSRSCNSLALQVQNSPSVNLGRCSTLGSDLSFRRVVGAVDQLHHYQHSLLRRPSHSPHYDYDNGMALCPSSSSLHMDSARCNSHHHSTTNPYYQLGLWFTLRSSANRNGEALPQIPKAYIRVKDENVTILTVKRYLVAKLGLSNEAEIDILCSGQSLPHLRTLKQVRDTLWLPRLVESSNSTSISVEDLRGTSTPHLMSLHYQRQCILN* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00096 276 PANTHER RING FINGER PROTEIN 1 136 IPR044171 GO:0007275
Pte3g00096 276 MobiDBLite consensus disorder prediction 1 21 - -
Pte3g00096 276 Gene3D - 121 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00096 Pte-Chr3 963435 966908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00096 170 227 C3H Transcription Factor Family AT3G23060 43.077 9.49e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00096 - - qsa:O6P43_030283 220.705