Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00094 ATGGCAACGGCTCTGATCCGACATGCGGCGTGCAAAAGCAGAGACACCCACTTGTTGAGATTGTTTACGTGTTATAGTTCTCGGTGTGTGAGTGGACTGCCTTCTCATCCTGCGGGCATCAGCGAGGCCGTGACTGCGAATCGTGATCTCACTGACAGAGTTCCGAAGAGCCCGTCTATTCATTCTCAGGCGAGCTCATTTGGTGGTGGTGGAGGATTGCCTTCATCCATGCGCGCTTTTTTGTTCAATGAACCGAATAAGCCAATGACCCTGCAAGAGTTTCACATGCCTCGGCCCAAAGCAGGAGAAGTCCTCGTCAAAACCAAGGCATGTGGAGTGTGCCACTCCGATCTTCATGTTATTAAAGGTGAACTTCCTTTTGCAAGCCCTTGCGTTTTGGGTCATGAGATAACAGGAGAGGTTGTCGAACATGGAACACTTACTGACAGCAGGATCATAGAAAGGTTTCCTATTGGATCACATGTCGTTGGGACTTTTATAATGCCTTGTGGTAATTGTTCGAATTGTGCAAAGGGCCATGACGATTTATGTGAACCCTTTTTCACTTATAATCGGGGAAAAGGAACTCTTTACGATGGTAATACCAGGCTATTCCTTCGCGACAGTGGAAAACCTGCATATATGTACAGCATGGGAGGCCTTGCGGAATACTGTGTAGTACCAGCAAATGCATTAGCCATTTTGCCTGACTCGTTGCCCTATGCAGAATCTGCAATTATAGGGTGTGCAGTATTCACTGCATATGGTGCTATGGCTCATGCGGCTGAGTTGCATCCTGGGGATTCCATTGCTGTTATTGGAATTGGTGGGGTTGGTTCAAGTTGTTTGCAGATAGCTAAAGCTTTTGGTGCCTCAGATATTATTGCAGTGGATGTTCATGATGAAAAGCTGAATCAAGCAAAATCATTTGGCGCGACTTATACAGTAAATGCAGCCAAAGAAAATGCTGTTGAAAAGATTATGGAAATAACCGGTGGAAAGGGTGTTGACGTTGCCGTGGAAGCGCTGGGAAAGCCACAAACATTTTCTCAATGCACTCGAAGTGTAAAAAGTGGAGGAAAAGCTGTGATGATTGGACTCGCACAATCTGGGGCTGTTGGAGAAGTAGACATAAACTCCCTTGTCCGTAGAAAGGTAAAAATTATAGGCTCGTATGGAGGCAGAGCAAGGCAGGACCTTCCAAAGTTGATTAGATTAGCAGAAACAGGCATTTTCAACCTCTCCATTGCCGTCTCTAGAAAATACAAATTCGAGGATGCGGAACAAGCCTTCCAGGACCTGAACAAAGGAATCATTGCCAGTCGAGCTGTAGTTGAGATCATGTAG 1347 0.4595 MATALIRHAACKSRDTHLLRLFTCYSSRCVSGLPSHPAGISEAVTANRDLTDRVPKSPSIHSQASSFGGGGGLPSSMRAFLFNEPNKPMTLQEFHMPRPKAGEVLVKTKACGVCHSDLHVIKGELPFASPCVLGHEITGEVVEHGTLTDSRIIERFPIGSHVVGTFIMPCGNCSNCAKGHDDLCEPFFTYNRGKGTLYDGNTRLFLRDSGKPAYMYSMGGLAEYCVVPANALAILPDSLPYAESAIIGCAVFTAYGAMAHAAELHPGDSIAVIGIGGVGSSCLQIAKAFGASDIIAVDVHDEKLNQAKSFGATYTVNAAKENAVEKIMEITGGKGVDVAVEALGKPQTFSQCTRSVKSGGKAVMIGLAQSGAVGEVDINSLVRRKVKIIGSYGGRARQDLPKLIRLAETGIFNLSIAVSRKYKFEDAEQAFQDLNKGIIASRAVVEIM* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00094 448 Pfam Zinc-binding dehydrogenase 277 408 IPR013149 -
Pte3g00094 448 FunFam Sorbitol dehydrogenase 254 392 - -
Pte3g00094 448 CDD Zn_ADH10 77 446 - -
Pte3g00094 448 Gene3D - 83 437 - -
Pte3g00094 448 Pfam Alcohol dehydrogenase GroES-like domain 102 232 IPR013154 -
Pte3g00094 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 239 412 IPR036291 -
Pte3g00094 448 SMART PKS_ER_names_mod 84 445 IPR020843 GO:0016491
Pte3g00094 448 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 76 445 - -
Pte3g00094 448 SUPERFAMILY GroES-like 73 280 IPR011032 -
Pte3g00094 448 Gene3D - 254 391 - -
Pte3g00094 448 FunFam Alcohol dehydrogenase (Zinc) 81 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00094 Pte-Chr3 938966 943258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00094 91 447 Monolignol Biosynthesis Gene Families AT4G37990 26.171 1.97e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00094 - - qsa:O6P43_030276 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00094 3 938966 943258 Pte3g00094 3 938966 943258 RCT