Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00076 ATGTCCGGCCGTTGGAAGAGAAAAGTTCACGAGGATCCTGGGTCTGACGGCGAGCCTGTTGGCCACCCGCCTGCCAACAAGTCCGCTAGGAAAGATTCAGATGACTCCGATGGCATCATCGTCTGCGAGTTAGGTAAAAATAAGAAAGTTACTGTGAGGAACTGGAATGGGAGGACTTGGGTCGATATACGTGATTTTTACACGAAAGACGGGAAGGAACTGCCTGGAAAGAAAGGTATCTCACTGTCGATGGACCAGTGGGAAATTCTTCGGGATCATGCAGATGAAATTGACGAGGTAGTTCGTCACAACCTTTAG 318 0.4906 MSGRWKRKVHEDPGSDGEPVGHPPANKSARKDSDDSDGIIVCELGKNKKVTVRNWNGRTWVDIRDFYTKDGKELPGKKGISLSMDQWEILRDHADEIDEVVRHNL* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00076 105 FunFam Putative transcriptional co-activator 32 105 - -
Pte3g00076 105 MobiDBLite consensus disorder prediction 1 17 - -
Pte3g00076 105 MobiDBLite consensus disorder prediction 1 38 - -
Pte3g00076 105 Gene3D Transcriptional Coactivator Pc4; Chain A 31 104 IPR009044 GO:0003677|GO:0006355
Pte3g00076 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Pte3g00076 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 26 103 IPR045125 GO:0003713|GO:0060261
Pte3g00076 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00076 Pte-Chr3 838844 840988 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Pte3g00076 PC4 6.9e-26 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00076 K25815 - nnu:104606666 147.132