Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00065 ATGAGTCTCTCTGCTCTACCTGGCATACGCGTACCACTCGTAGCTCCTCTGTACTCTACTCCTCCCAATAGGGCTAACGTCACTGAGAACATTGCAATAATGGGTCGTAATTTGAATTTCTCGATCACTACGAGCCGGGCAAAGGCAAAAGTCGTTCCAATTATTCGTGATTGTTCACTTCGCATTCCTTCTGGGCAGTTGTGGATGCTGCTTGGGCCAAATGGTTGCGGAAAATCCACCCTTTTAAAGATATTGGCTGGTCTTTTGAATCCAACTTCGGGGAGTTTGTATATCAAAAAGCCATGGAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCAACTGTAGAAGCTGATGTCGCCTTTGGTCTCGGTAAATTCAGCCTTACCCTTGATGAAGTAAGATCCAGGGTTTCAAGTGCTCTCAGTGCGGTAGGCATGTCTGAATACATGCAGAGATCTGTCCAAACTCTAAGCGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAAAGTTTTATTATTAGATGAGCTGACAACATTCTTGGATGAAAATGACCAGGTTGGTGTCATCAAAGCGGTAAGAAATTCTTTGGACAGCTCCGGAGAAGTTACAGCGCTGTGGGTGACCCATCGTTTAGAAGAGCTAGATTATGCTGATGGTGCCATCTATATGGAAGATGGAAAAGTTGTGATGCATGGGGATGTATCAACAATAAGGGATCTCATTGCTGCCAGGCAATCTGCATATATAGAACAGATAAATTCTTGA 795 0.4453 MSLSALPGIRVPLVAPLYSTPPNRANVTENIAIMGRNLNFSITTSRAKAKVVPIIRDCSLRIPSGQLWMLLGPNGCGKSTLLKILAGLLNPTSGSLYIKKPWSFVFQNPDHQVVMPTVEADVAFGLGKFSLTLDEVRSRVSSALSAVGMSEYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDENDQVGVIKAVRNSLDSSGEVTALWVTHRLEELDYADGAIYMEDGKVVMHGDVSTIRDLIAARQSAYIEQINS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00065 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 249 IPR027417 -
Pte3g00065 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 33 252 - -
Pte3g00065 264 SMART AAA_5 64 237 IPR003593 GO:0016887
Pte3g00065 264 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
Pte3g00065 264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 260 IPR003439 GO:0005524
Pte3g00065 264 CDD ABC_cobalt_CbiO_domain1 36 237 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pte3g00065 264 Pfam ABC transporter 56 187 IPR003439 GO:0005524
Pte3g00065 264 Gene3D - 31 263 IPR027417 -
Pte3g00065 264 FunFam ABC transporter I family member 10 29 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00065 Pte-Chr3 775565 778175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00065 52 247 Calmodulin-binding Proteins AT2G36910 32.258 1.28e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00065 - - qsa:O6P43_023370 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00065 3 775565 778175 Pte3g00065 3 775565 778175 RCT