Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00063 ATGCCAGCTTGGTGGGGAAGAAAATCCAACAAGAGCAAAGACCAGCTACAGCAAAACGCACATGTTGGAAGTCAATTGAATTTCACTAAGAATGATGCCAAGAAAGGTAACTCACCTAGACCCAGCAAGGATTTTACTTCTTCGGCTACTGGCCCTTCTGCCACCTCTCCTGCGGGATTGTCATGTTTCGATTCAGATGGTGCCGAGAGAAAAGGAATTCCTTTACCAAGACCTTCTGTCTCTTCCACGCAAAGCTTGGGAAATGATCATAATACTGGATTAAGATCTGGCTCCGTATCTGTTTCCAGCGTCAGTTCGTCTGGCTCCTCCGACGATCATCCAATTTCTCAATTGAGATTACAAAGTGATTCGAAGTTCATAGCACGATCAAGAAGCCCTGGTCCTGGGTCTAGAGGACCTGCCAGTCCCACCTCACCTTTTCATTCAAGGCTTCAATCTCTGAACCTTGACTCCCCTACTGGAAAGCAGGAAGATGCGAGAAGTGAATGTCATCCACTGCCTCTCCCCCCCAGTTCTCCTTCTAGCCCTTCAACACTCTCCGGAACAAGAACTATTAATGCCGCAGAAAACATAACTGGTAATTTGTCAAAATGGAAGAAAGGAAAGCTTCTAGGAAGAGGAACATTCGGGCATGTTTACCTTGGATTTAACAGTGAAAGCGGCCAGATGTGCGCCATAAAAGAAGTCAGAGTTGATTCAGATGATCAATCATCAAAAGAATCTCTCAAACAACTAAACCAGGAGATAAATTTGCTCAGTCGACTCTCACATACCAATATTGTTCAATATTATGGAAGTGAACTGAGTGAAGAGAGACTCTCAGTTTACCTTGAATATGTTTCTGGTGGTTCGATCCACAAACTACTTCAAGAATATGGTGCATTTAAAGAACCTGTCATTCAAAATTATACAAGGAAGCTTATTTCTGGACTTGCGTACTTGCATGGAAGGAATACTGTACACAGGGACATAAAAGGGGCTAACATATTAGTGGACCCCAATGGTGAAATCAAGTTGGCAGATTTTGGCATGGCTAAACATATAACAAGTTGTTCTTCCATGCTATCATTCAAGGGTAGTCCGTACTGGATGGCACCTGAGGTGGTAATGAATACAAATGGGTATAGTCTTGCCGTAGATATATGGAGCTTAGGATGTACAGTTCTTGAAATGGCCACCTCAAAACCTCCTTGGAGCCAGTTTGAAGGGGTTGCTGCTATATTTAAAATCGGGAACAGCAAAGATATCCCTGAAATTCCTGATCACCTTTCACATCATGCAAAGAGTTTTATAAAGCTATGCTTGCAGAGAGATCCATCAGCACGACCAACAGCCTCACAGCTACTAGAGCACCCCTTTATACGAGATCAGTCAATTACAAGAGTTCCCAACACCAAATTAACGAGGGATTCTGTCCCCTACACATTTGTAGGAAGCCGCACACTGGTATATCCTCTCGTTGAATCGTTCATGTGA 1497 0.4342 MPAWWGRKSNKSKDQLQQNAHVGSQLNFTKNDAKKGNSPRPSKDFTSSATGPSATSPAGLSCFDSDGAERKGIPLPRPSVSSTQSLGNDHNTGLRSGSVSVSSVSSSGSSDDHPISQLRLQSDSKFIARSRSPGPGSRGPASPTSPFHSRLQSLNLDSPTGKQEDARSECHPLPLPPSSPSSPSTLSGTRTINAAENITGNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVDSDDQSSKESLKQLNQEINLLSRLSHTNIVQYYGSELSEERLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRKLISGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHITSCSSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSQFEGVAAIFKIGNSKDIPEIPDHLSHHAKSFIKLCLQRDPSARPTASQLLEHPFIRDQSITRVPNTKLTRDSVPYTFVGSRTLVYPLVESFM* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00063 498 MobiDBLite consensus disorder prediction 142 161 - -
Pte3g00063 498 ProSiteProfiles Protein kinase domain profile. 205 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00063 498 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 49 471 - -
Pte3g00063 498 SMART serkin_6 205 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00063 498 MobiDBLite consensus disorder prediction 10 60 - -
Pte3g00063 498 Gene3D Transferase(Phosphotransferase) domain 1 202 481 - -
Pte3g00063 498 MobiDBLite consensus disorder prediction 1 189 - -
Pte3g00063 498 SUPERFAMILY Protein kinase-like (PK-like) 203 488 IPR011009 -
Pte3g00063 498 Pfam Protein kinase domain 206 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g00063 498 MobiDBLite consensus disorder prediction 77 128 - -
Pte3g00063 498 ProSitePatterns Protein kinases ATP-binding region signature. 211 234 IPR017441 GO:0005524
Pte3g00063 498 FunFam Mitogen-activated protein kinase kinase kinase 203 485 - -
Pte3g00063 498 CDD STKc_MEKK1_plant 204 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00063 Pte-Chr3 767967 773108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00063 1 489 MAP Kinase Kinase Kinase AT1G53570 63.230 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte3g00063 Pkinase 4.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00063 K04421 - qsa:O6P43_030333 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00063 3 767967 773108 Pte3g00063 3 767967 773108 RCT