Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00061 ATGGTAACTCTCCTCCTTCGTGTACTGATCTCGCTCCTACTCTTCTTTTCTCTCTCCTCTGCCTCCAGCCTTCACCACCATGCTGCACCCCCTTCATCGAACCCATCACCGGATTCAATCCCGTTGGAAATCCAACAAGCCTGCAAGGCCACTCGATTCCCTGACCAATGTGCAACCTTGCTAACCCAGTACGACTACTACCTCCCTTTCGACCCGGACCCGGTTCAAATCATCCAATCCACTATCGAGTTAGCCTCCGACAACCATAAGACCGTCAAATCCAAGCTGAGGTCCATCCGGGACTCCGCCGATCTAAATCGCACTTACGTTGCAGTTACCTGTCTTGAAGTGCTCCACAACTCCGAACACCGCACCTCCCTGACCGGTGAAGCGCTTACAGATGGTAAGCTCAAGGATGCTCGGGCATGGATGAGTGCAGCGTTGGTTCACCAGTCTGGTTGCTTGTCAGGCCTCAGGCGCATCAACCATACTCGATTGGTCGCTAAAACGATGGCCGTTTTGGATGCCCTCACAAACATCTCCAGCATGGTGCTCGGCATGTTGAGATCCCTTGATATTTTCGGAGACGACAGCGCTTCGTGGAAGCCTCCCATGACGGAGAGAGACGGTTTCTGGGAGCCATCCGATTCTGGTTACGGATCAAGAAACATGTTCAGGCCAAGTTTCCCGTCGAAGTCAGATGCGGACGCTACGGTCTGTAAGAACCGGAGCTTAGGATGTTTTAAGACAGTGCAGGAAGCGGTGGACGCAGCACCGGACAACGGTGGCGCCAAGAAGTTTGTTATTCACATAACAGAAGGGGTTTATGAAGAGACCGTTAGGATTCCTTTAGAAAAGAAGAACGTTGTATTTTTGGGTGATGGCGTGGGCAAAACAGTAATTACGGGTTCACTGCATGTGGGCATGAAAGGAATATCAACGTACCACACCGCGACTGTTGGAGTTCTTGGTGATGGGTTCATGGCAAGGGATCTAACCTTCGAAAACACAGCTGGGTCTGATGCGCAACAAGCATTGGCTTTTAGGTCAGACAGTGATCGCTCGGTGGTTGAGAATTGTGAATTTATAGGCAATCAAGACACACTCTGCGCACTCTCCCTGCGCCAATTCTATAAATCATGTCGCATTGTTGGAAACGTGGACTTCATTTTTGGAAATTCAGCTTCTGTTTTCCAGGATTGTGAAATCATGGTCACCTCCCGACATGATGAGAAGCCAGAAGGTGAGACCAACGCCATCACCGCACATGGCAGGACAGACCCTGCTCAATCCACAGGCTTTGTTTTCCACAACTGTTCGATCAATGGCACAGCGGAGTACATGGCAGAGTACCAGAGCAATCCTAGGGTACACAACACTTTTTTAGGGAGGCCATGGAAGGAGTACTCAAGAACAGTGTTCATACAGTGCGAAATGGAAGCTCTTATCAGACCTGAAGGATGGATGCCATGGGATGGCGATTTTGCGCTGAACACTCTTTACTCTGCAGAGTTTCATAATTCAGGACCAGGGTCTAATTTATCTCATAGAGTGGACTGGAGTAGCACTATCCCAGCTAACCATATTTCTATATATTCAGTAAAGAATTTTATTCAAGGTGATGAGTGGATTCCGACATCCCAAAGCATAACTCATCGTGATAAAGTTCATCGAGGACGATCAAGATTTTGA 1692 0.4888 MVTLLLRVLISLLLFFSLSSASSLHHHAAPPSSNPSPDSIPLEIQQACKATRFPDQCATLLTQYDYYLPFDPDPVQIIQSTIELASDNHKTVKSKLRSIRDSADLNRTYVAVTCLEVLHNSEHRTSLTGEALTDGKLKDARAWMSAALVHQSGCLSGLRRINHTRLVAKTMAVLDALTNISSMVLGMLRSLDIFGDDSASWKPPMTERDGFWEPSDSGYGSRNMFRPSFPSKSDADATVCKNRSLGCFKTVQEAVDAAPDNGGAKKFVIHITEGVYEETVRIPLEKKNVVFLGDGVGKTVITGSLHVGMKGISTYHTATVGVLGDGFMARDLTFENTAGSDAQQALAFRSDSDRSVVENCEFIGNQDTLCALSLRQFYKSCRIVGNVDFIFGNSASVFQDCEIMVTSRHDEKPEGETNAITAHGRTDPAQSTGFVFHNCSINGTAEYMAEYQSNPRVHNTFLGRPWKEYSRTVFIQCEMEALIRPEGWMPWDGDFALNTLYSAEFHNSGPGSNLSHRVDWSSTIPANHISIYSVKNFIQGDEWIPTSQSITHRDKVHRGRSRF* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00061 563 CDD PMEI-like_3 47 182 - -
Pte3g00061 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 191 IPR035513 -
Pte3g00061 563 Pfam Plant invertase/pectin methylesterase inhibitor 44 183 IPR006501 GO:0004857
Pte3g00061 563 NCBIfam pectinesterase inhibitor domain 11 188 IPR006501 GO:0004857
Pte3g00061 563 Gene3D - 234 555 IPR012334 -
Pte3g00061 563 SMART PMEI_2 39 187 IPR006501 GO:0004857
Pte3g00061 563 FunFam Pectinesterase 4 233 554 - -
Pte3g00061 563 Pfam Pectinesterase 236 541 IPR000070 GO:0030599|GO:0042545
Pte3g00061 563 FunFam Probable pectinesterase/pectinesterase inhibitor 51 42 190 - -
Pte3g00061 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 188 IPR035513 -
Pte3g00061 563 PANTHER PECTINESTERASE 16 546 - -
Pte3g00061 563 SUPERFAMILY Pectin lyase-like 233 546 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00061 Pte-Chr3 743465 746010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00061 34 547 Carbohydrate Esterase AT5G09760 61.004 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00061 - - qsa:O6P43_023358 699.123