Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00055 ATGGAAACAATCAGAGCCTTCGAGACTCCGAGCGACAACCAGTTCGATTCGCTGTCGAAGATCCTTCGCTTTCCAGAAGAAAGTCAACAAAATCGGGATTTCCTCGTCAAAGCCGATGGCTTTGCACTCAAGCTTGTTGATTTTCTCGACAATGCAGCTGGTGGAACGGCTGCTAGCGTCAGCGTTCCATTTTTAGAAGTGGTGGTTCGGGTTTTGAATTTGGTAGCGGGTAAAATTAGCGATCTAGAACAATTGAAGAACTCGATATTGAGAAACAACCAGAACTGCTTGTCCTCTCTGCTTGTTGTTCTACTGCAAGGCAATTCCGATTCCAAAATCTGTACTGCTAGGGTTTTGGAATCCGTCTCCATCGATACCGAAACGAAGTTGTTGATCGCCAAAAAATATGGGTTGATAACCGAATTGCTAAAGCTAATCACGGCAGACAAAGATCCCTCCCTCGTGGAAGCCAGCTTGTCTTGCTTAATTCCAATCTCCATGCCAAAACGAAACAAAATTAAACTTGTTAAACTCGGTGCCATCAAGGCACTAACAAAACTCGTTTCTGAATCAAACCCGAACCCCAAAGTGTCGACAACAGAGAAAGTTCTGAAACTGCTCGAAACACTGTCTTCCTGTAAGGAAGGAAGTTTAGCAATATGTGAAGATCAAGTTTGTGTCACGATGATTTTGCAGAAAGTGATGAAAGTATCACGGGTGGCGACAGAGCACATTGTGATGATACTGTGGAGTTTGCGTTATCTTTTTAGAGATGAAAAGGCTCAGGAGGTTGTGAAAAAGGCTAATGGGTTGACGAAGATTCTGCTATTGATGCAGAGCAATTGTTCACCACCGGTTCGGCAAATGTCGGTCAATTTGCTCAAGGTTTTCCGTGTGAAATCAAAGTCCTGTCTTTCGTTTTACGATACAAAAACGAAACATATCATGTCGTTTTGA 957 0.4316 METIRAFETPSDNQFDSLSKILRFPEESQQNRDFLVKADGFALKLVDFLDNAAGGTAASVSVPFLEVVVRVLNLVAGKISDLEQLKNSILRNNQNCLSSLLVVLLQGNSDSKICTARVLESVSIDTETKLLIAKKYGLITELLKLITADKDPSLVEASLSCLIPISMPKRNKIKLVKLGAIKALTKLVSESNPNPKVSTTEKVLKLLETLSSCKEGSLAICEDQVCVTMILQKVMKVSRVATEHIVMILWSLRYLFRDEKAQEVVKKANGLTKILLLMQSNCSPPVRQMSVNLLKVFRVKSKSCLSFYDTKTKHIMSF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00055 318 SUPERFAMILY ARM repeat 81 304 IPR016024 -
Pte3g00055 318 Gene3D - 18 305 IPR011989 -
Pte3g00055 318 PANTHER WDSAM1 PROTEIN 11 306 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00055 Pte-Chr3 708198 709582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00055 18 319 U-box Gene Family AT5G64660 50.165 8.39e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00055 - - qsa:O6P43_023349 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00055 3 708198 709582 Pte3g00055 3 708198 709582 RCT
Pte3g00055 3 708198 709582 Pte1g02113 1 42309060 42311576 RCT