Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00053 ATGGCATCCATGAACTCCAGCGTTTTGGCTTGCAACTATGCTATGACCGCTGCAGGGACCACTGAGCTTAATCCAAAGGTTACTTCCATGCCTTCTGTTGCATCACCCGTTGTATCAAGCCGCAAGTTTCCTGCTTTGAAGGCCCAACAGGCCGAGGTTTCTCCAGGAAGAAGGGCTGCACTTGTTTCCTTAGCAGGCATTGTTTTCACAGTTGCAACTGCTGCCTCTAATTCAGCTGCCAACGCTGGGATCATAGAGGAATACCTGGAGAAGAGCAAGGCCAACAAGGAATTGAACGACAAGAAGAGGTTGGCGACAAGTGGAGCAAACTTCGCAAGAGCATATACAGTAGAATTTGGCACTTGCAAGTTTCCGGAGAACTTCACTGGTTGCCAAGATCTTGCTAAGCAAAAGAAAGTTCCATTCATCTCTGACGATTTGGCTATGGAATGCGAAGGCAAAGACAAATACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTAA 504 0.4683 MASMNSSVLACNYAMTAAGTTELNPKVTSMPSVASPVVSSRKFPALKAQQAEVSPGRRAALVSLAGIVFTVATAASNSAANAGIIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLAMECEGKDKYKCGSNVFWKW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00053 167 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 47 167 IPR008796 GO:0009522|GO:0015979
Pte3g00053 167 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 167 IPR008796 GO:0009522|GO:0015979
Pte3g00053 167 Gene3D - 83 167 IPR044907 -
Pte3g00053 167 FunFam Photosystem I reaction center subunit N 83 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00053 Pte-Chr3 696934 701099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00053 1 138 Calmodulin-binding Proteins AT5G64040 60.417 3.35e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00053 K02701 - jre:109021950 255.758