Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00040 ATGGCATTAGTGGGCTTCTTAGAAATATCCTTGGCATTTATTTGCTTTGTATTCCTAAGATGTCTGAGAGGCACCAAAGGGTATCGACAGAGTCTGCCATTTGTGGGGTGGTTACCAAGTGTTTTCCTCCGCCTCAACAAGATTCACACTGTATGTACCAAAATCTTAGAAAGCAGCCCATCTAATACCTTTATATTAAGAGGCCTTTGTTTCACAGGCACGGACATATTAATCACAGCTAACCCTGCCAACGTCAACTACATCATGACTTCTAACTTCGCCAATTACCCCAAAGGTCCCAACTTCAACGAGATATTCGAGATTTTGGGGAAAGGGATTTTCAATTCTGATTTCCACTTGTGGAGGGATCAGAGAAAAATGGCTCAGGCATTGATGAACCATCGCAATTTCCTCAAATTCGTGGCAAGTATAAGTCAGAATAAAGTAGAGACAGGCTTGGTTCCAATACTTGAGTATGTCGCTAAACAAGGACTCGTCGTTGATATTCAGGATTTATTCCAAAGATTCACATTTGATTCCACATGCAACTTGATCACAGGTTATGACCCCAAGTGCCTAACCATTGAGTTTCCGGAAGTGCCCTTCCCTAAAGCCCTGGATGATGCTGAAGAAGCATTATTCTACCGCCATATCATGCCAGAAAGCTTTTGGAAATTACAAAAGTTTCTGGGAATTGGAGAGGCCAAGAAACTAAGTAAAGCTTGGTCAGTCCTAGACAAAGTTATAGCAGGATACATAGTGAGGAAAAGACAAGAGCTAAACAAAGGAAGTGGAACAGAAGAAGATGGAGAAGTAGGAGTCGATTTGCTTACATCATACATGAACATTGCCGAAAGTGAAATGATGGGATCGAAATCAAATAATGATCAGTTCTTGAGAGACACAGTTCTAAATTTATTGATTGCCGGGCGTGACACTACAAGCTCAGCTCTATCTTGGTTCTTCTGGCTTGTTACCAAGAATCCTTGTGTTGCTAACATAATCAGAGAAGAACTCAAATCAACAATACCACCTAAGGACGCCTGCAAATGGAGAGTATTTAGTATAGAAGAGGTTAAGCAGCTAAGTTATTTGCATGCTGCATTATGTGAATCACTAAGGCTATACCCACCAGTCCCATTCCAACACAAATCTCCTACACGACCTGATATCCTTCCAAGCGGACACCATGTTGATCCAAAGATGAAAATCATTTTTCCCTTGTATGCATTAGGCAGAATGACATCTGTGTGGGGCGAAGACAGCCTAGAGTTCAGGCCTGAGAGGTGGATTTCCGAGCGAGGATCAGGAGTTAAACACATGCCATCATACAAGTTTTTGGCTTTTAATGCAGGGCCAAGAACATGTCTAGGAAAAGAAGTGGCCTTCACTCAGATGAAGCTCGTAGCAGCGAACATCATCCACAATTATCAGGTAGAAGTAGTGGAAGGACACCCTGTCGTACCAAGTGTTTCCGTCATTCTTCACATGAAAAATGGGTTGAGAGTTAGGGTCAAGAAGAGATGGACTTGA 1533 0.422 MALVGFLEISLAFICFVFLRCLRGTKGYRQSLPFVGWLPSVFLRLNKIHTVCTKILESSPSNTFILRGLCFTGTDILITANPANVNYIMTSNFANYPKGPNFNEIFEILGKGIFNSDFHLWRDQRKMAQALMNHRNFLKFVASISQNKVETGLVPILEYVAKQGLVVDIQDLFQRFTFDSTCNLITGYDPKCLTIEFPEVPFPKALDDAEEALFYRHIMPESFWKLQKFLGIGEAKKLSKAWSVLDKVIAGYIVRKRQELNKGSGTEEDGEVGVDLLTSYMNIAESEMMGSKSNNDQFLRDTVLNLLIAGRDTTSSALSWFFWLVTKNPCVANIIREELKSTIPPKDACKWRVFSIEEVKQLSYLHAALCESLRLYPPVPFQHKSPTRPDILPSGHHVDPKMKIIFPLYALGRMTSVWGEDSLEFRPERWISERGSGVKHMPSYKFLAFNAGPRTCLGKEVAFTQMKLVAANIIHNYQVEVVEGHPVVPSVSVILHMKNGLRVRVKKRWT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00040 510 Gene3D Cytochrome P450 21 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PANTHER CYTOCHROME P450 17 502 - -
Pte3g00040 510 Pfam Cytochrome P450 74 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 CDD CYP86A 64 501 - -
Pte3g00040 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 SUPERFAMILY Cytochrome P450 19 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Pte3g00040 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte3g00040 510 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00040 Pte-Chr3 588606 590587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00040 1 508 Cytochrome P450 AT4G39490 53.846 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00040 - - vvi:100260973 654.44