Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00028 ATGGTGGAGACCAATAAGAGTCAGAGGAATCAGGAGCATAGTCTGGAGGGAACCATCATAGGCTGCGCATCTTGCATTCTTCATTTGACCCTTCTTATTTTTGCCCAGTTTGCTTTGAGATCTACGAGCATCCATTGTCCTAAACCTCCTTTGCTTCTACTTAATGCTTCGTTTCCTATGTCAAATGTTCTTCAGTCACTTATATCAAAAGGGGCATCTATTGCTGCCATGTCCATTTTGAAGAAAATACCGACATCAGTCTTTGGGAGTTACTTCGCTTTCATGGCAATTGAAAGCTTGCCTGGAAATCAATTTTGGGAGAGAATATTGGTGCTGGAAGAGCATCAAGAACAAACTGATCTTCAGGCAAGAACTGTAAACATTGAGAGTGGAGAACTTCTGGATGAAATTGTTACAGGAAGTTGCGGGGAGATCAGGCGCACACACAGTCCAAAGATAACAAGTTCAACACCGTCTTCAGGTGGAGATATAAAACCTGGTAACAGTCCTCTACTTTCACCAATGGTGTATAGCCCTCGCATAACTGAACCTCAAAGTGAGAGGAGTCCACATCGTGGAATACGACTTCGTTTGGCGAAGGGGTACAGAAACTCAGAAAGACAGCGACGGTTCTCCCATGGGCTTTAA 648 0.4383 MVETNKSQRNQEHSLEGTIIGCASCILHLTLLIFAQFALRSTSIHCPKPPLLLLNASFPMSNVLQSLISKGASIAAMSILKKIPTSVFGSYFAFMAIESLPGNQFWERILVLEEHQEQTDLQARTVNIESGELLDEIVTGSCGEIRRTHSPKITSSTPSSGGDIKPGNSPLLSPMVYSPRITEPQSERSPHRGIRLRLAKGYRNSERQRRFSHGL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00028 215 PANTHER ANION EXCHANGE PROTEIN 60 119 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pte3g00028 215 MobiDBLite consensus disorder prediction 147 172 - -
Pte3g00028 215 MobiDBLite consensus disorder prediction 148 166 - -
Pte3g00028 215 Pfam HCO3- transporter family 67 118 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00028 Pte-Chr3 464990 467115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00028 60 112 Antiporters AT2G47160 71.698 1.23e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00028 K24194 - qsa:O6P43_022707 92.0485