Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02691 ATGGGAAGCAAAGGGGCACTCTTCCGTTATGCAGATGTTGTGGACAAGTTGCTGCTTTTCTTTGGGACTTTGGGCTGCATGGGAGATGGGCAGCAAACCCCTTTAACCATGCTCCTTCTTAGTAGTATCGTAGAAGAATATGCAGCTCATGGAGTCAAACATTCTCTCTCCCACCACACTGTGAACAAGTACACTCTCAGGATTATATACCTTGCCACTGGGGTCGGGATAAGCTCTTTCATTGAGGGGGTCTGTTGGACAAGAACAGCAGAAAGACAGACTTCTCGGATGAGAACTGAGTATCTAAGTGCAATCCTCAGACAGGAAGTTGGTTTCTTTGACACTAACTCTACTTCTACCTCAGCCTTTCAAGTCATTTCTACAGTATCTTCCGATGTACAAGTTATCCAAGACACAATGGCAGAAAAGATACCAAACTTCCTGGCTAATATGTCATCATTTTTATCGAGCATTGTAGTTGGCTTTATACTTTCCTGGCGACTTGGAATAGCCAGCTTTCCATTTTCAATTTTAATGATCCTCCCTGCCATCATATATGGGGCAAAGCTGAAGAACCTGGGAGAACAAATAAAGGATGCATATGGCGTTGCTGGTGGGATTGCAGAACAATCCATCTCATCGATCCGTACTGTTTATTCGTACGTAGGGGAGAATCAAACACTGAAGAGATTTAACCGTGCACTAGAGAAAAGTATGCAGCTCGGCTTCAAACAAGGTTTCGGAAAAGGACTTGTGATTGGAAGCCTGGGTTTGATGTATGCAACTTGGGCATTTCTATCTTGGGTTGGCAGTGTTCTGGTCACAAAGAAACAAGAAAATGGAGGCCGTGTGTTTATGGGTGAAATCTGTGCCATATGGGGAGGACTGTCTCTGATGAGTGCACTCCCAAACCTTACTTTCATGCTTGAAGCGACCATTGCAGCTACAAGGATATGCCAGATGATAGATCGAATTCCTAGTATCAATTCTGAGAATAAAAAAGGGAAGATATTAAAAGATTTCAGAGGAGAAATTACATTTAAAGCAGTTGATTTCAGCTATCCATCAAGACCAGAAAAACCGATTCTTCAAGGGCTAGATCTTCATGTCAAAGCTGGAAAGACAGTGGGCCTGGTTGGAGGAAGTGGTTCTGGCAAGTCTACTATCTTCTCTTTGCTTCAAAGGTTTCATGATCCAGTCAATGGAGATATTTTGCTTGATCGGCACAACATAAAGAGGCTTCAGATTCAGTGGTTGAGATCACAGATGGGGTTGGTTAATCAAGAGCCCATACTTTTTGCAACATCAATAAAAGAGAACATCTTATTTGGAAAAGAGGAAGCTGCAATGGAAGAAATGATCTGTGCAACTAAAGCTGCGAATGCACATGAATTCATCTCTAAACTACCTGATGGATATGACACTCAGGTTGGACAATTGGGAGTTCAGTTGTCCGGAGGGCAAAAGCAAAGAATTGCCATTGCAAGGGCTTTAATTAGGGACCCAAAAATCCTCTTGCTAGATGAAGCAACAAGTGCTCTTGATGCGCAATCTGAGAGAGTGGTGCAAGATGCACTGGACATGGCATCCCGAGGAAGGACAACGCTAGTCATTGCCCATCGTCTCTCCACAGTCCAAAAGGCTGATGTGTTGGTTGTTATTCAGTCCGGTAGAGTGGTGGAATCAGGTTCTCATGATGAGCTCATGCAACGGAATAATGGAAGAGGAGGGATATATAGCGAAATGGTTCAGTTGCAACAGTCAACCACTGAAAATGAAACTTCTTACCGATTGAAATTGCCAAGCAGTTCAATTCCACATACACCTGTAAGAAAAATTCTCAGCTGGCAGAGCAGCCCGGCAACCCCATTTAGCCCTGCATATTCAATCAGTATTCCAGAGTCAAGCCTAGAATATAATGAGGAAAGCTTGACAAAATCCTCGCGTTCTAGTTCTTTTCAATGGCGTTTACTACGAATGAATGCCCCTGAGTGGAAGCATATGATACTTGGCTGTTTGGGAGCTTTTGGTTCAGGCATGGTTCTACCAATCAACTCATATTGCTTAGGAGCAGTTGTGTCAGTTTATTTTATTGACGACAATTCTATCCTCAAAAAAGAAATCAGATCCTATTCCTACATCTTTCTTACCCTTGCGGTGCTCAGCTTCATTTCAAGTCTACTGCAGCATTACAACTTTGCAATTATGGGAGAAAGGTTAATGAAAAGAACGAGGGAAATGCTGCTTGCTAAGATTCTCACCTTTGAGATTGGTTGGTTTGATAAAGATGAGAACTCAAGTGCATCAATCAGTGCACGTCTAGCCACGGAATCTAGTCTGGTTCGATCTCTTGTAGCAGAACGAATATCATTGTTAGTTCAGGTTTTCTTCAATGCCTCCCTGGCTTACATTTTGAGTTTTGTCCTTGCATGGAGGTTAGCCATTGTAATGGTTGCCATGCAACCATTCATCATTTCGTGTTTTTATTCGAAGAATATTTTCATGAAAAGAATGTCCCACAAAGCACAAAAGGCTCAAGGTGAGAGTAGTCAATTAGCGATGGAAGCTACCATACATCATAGGACCATCACAGCATTCTCCTCTCAGAAAAGGATGCTCACTCTTTTTGAAATCGCATTGAAAGCCCCCAGGAAGGAGAGCGTTAAGATGGCATGGATTTCAGGTCTAGTTCTGTCGTTCTCTCAATTCCTGACAACAGCCTCCATTGCATTTACTTTCTGGTATGGAGGGATTTTAGTGAATCAAAATATTGTAAAACCAAAGCAACTCTACCAGGTATTCTTCATTTTAATGGGTACAGGGAAAGGCATCGCAGATGCAGGAACCATGACTTCAGACATTGCAAAAAGTGGCAAAGCGATTCGATCTGTTTTTGCAATCCTGGACAGAACGAGTTTCATCCATCCTGAAGACTCTTCAGGTGCAAAGGTCAGGAAGGCATTGAAGGGGGACATAGAATTGAAGAGTGTCTTCTTTTCTTATCCAGCAAGACCTGATCATCTGATTCTTCAAGGGCTGACTCTGAAGATTCAAGCCGGAAAAACAATAGCACTCGTAGGACCGAGTGGCTGCGGGAAATCTACCATTATTGGTTTAATCGAACGATTTTATGATCCCACAAGGGGCACAATACTCATAGATAATTGTGATGTCAAAAAATATAACCTGAGAAGTTTAAGATCACACATTGGTTTAGTGAGTCAGGAGCCGACTCTCTTCGCTGGAACAATTCGTGACAACGTTGCTTATGGTAATGGAAATGTAGCAGAATCAGAAATAAAAAAGGCTGCAAATCTTGCCAATGCTGACGATTTTATCAGCTCTATGAAAGATGGCTACGACACTTGCTGTGGAGAGAGAGGAGTGCAATTATCAGGTGGCCAGAAACAAAGAATAGCTATTGCTCGAGCCATACTCAAGAATCCGGAGATTCTCCTATTAGATGAGGCCACCAGCGCTCTAGATAGCGTGTCAGAGAAAATGGTACAGGAAGCATTAGAGAAGATGATGGTGGGAAGAACATGTATCATCATAGCTCACCGCTTATCCACAATACAAAATGCAGACTCCATAGCTGTGTTGAAGAATGGCAAGTTGGTGGAATTAGGATCCCACTCAGACCTGATAAGAAACAAGCCCAATGGCGCATACTGCTCCATGATTAGGCTTCAAAATAATCGCTATGCTTGA 3711 0.4266 MGSKGALFRYADVVDKLLLFFGTLGCMGDGQQTPLTMLLLSSIVEEYAAHGVKHSLSHHTVNKYTLRIIYLATGVGISSFIEGVCWTRTAERQTSRMRTEYLSAILRQEVGFFDTNSTSTSAFQVISTVSSDVQVIQDTMAEKIPNFLANMSSFLSSIVVGFILSWRLGIASFPFSILMILPAIIYGAKLKNLGEQIKDAYGVAGGIAEQSISSIRTVYSYVGENQTLKRFNRALEKSMQLGFKQGFGKGLVIGSLGLMYATWAFLSWVGSVLVTKKQENGGRVFMGEICAIWGGLSLMSALPNLTFMLEATIAATRICQMIDRIPSINSENKKGKILKDFRGEITFKAVDFSYPSRPEKPILQGLDLHVKAGKTVGLVGGSGSGKSTIFSLLQRFHDPVNGDILLDRHNIKRLQIQWLRSQMGLVNQEPILFATSIKENILFGKEEAAMEEMICATKAANAHEFISKLPDGYDTQVGQLGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERVVQDALDMASRGRTTLVIAHRLSTVQKADVLVVIQSGRVVESGSHDELMQRNNGRGGIYSEMVQLQQSTTENETSYRLKLPSSSIPHTPVRKILSWQSSPATPFSPAYSISIPESSLEYNEESLTKSSRSSSFQWRLLRMNAPEWKHMILGCLGAFGSGMVLPINSYCLGAVVSVYFIDDNSILKKEIRSYSYIFLTLAVLSFISSLLQHYNFAIMGERLMKRTREMLLAKILTFEIGWFDKDENSSASISARLATESSLVRSLVAERISLLVQVFFNASLAYILSFVLAWRLAIVMVAMQPFIISCFYSKNIFMKRMSHKAQKAQGESSQLAMEATIHHRTITAFSSQKRMLTLFEIALKAPRKESVKMAWISGLVLSFSQFLTTASIAFTFWYGGILVNQNIVKPKQLYQVFFILMGTGKGIADAGTMTSDIAKSGKAIRSVFAILDRTSFIHPEDSSGAKVRKALKGDIELKSVFFSYPARPDHLILQGLTLKIQAGKTIALVGPSGCGKSTIIGLIERFYDPTRGTILIDNCDVKKYNLRSLRSHIGLVSQEPTLFAGTIRDNVAYGNGNVAESEIKKAANLANADDFISSMKDGYDTCCGERGVQLSGGQKQRIAIARAILKNPEILLLDEATSALDSVSEKMVQEALEKMMVGRTCIIIAHRLSTIQNADSIAVLKNGKLVELGSHSDLIRNKPNGAYCSMIRLQNNRYA* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02691 1236 Gene3D - 335 587 IPR027417 -
Pte2g02691 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 347 581 IPR003439 GO:0005524
Pte2g02691 1236 FunFam ABC transporter B family member 4 335 593 - -
Pte2g02691 1236 Pfam ABC transporter 363 512 IPR003439 GO:0005524
Pte2g02691 1236 SMART AAA_5 372 544 IPR003593 GO:0016887
Pte2g02691 1236 SMART AAA_5 1019 1205 IPR003593 GO:0016887
Pte2g02691 1236 Gene3D ABC transporter type 1, transmembrane domain 650 970 IPR036640 GO:0005524|GO:0016020
Pte2g02691 1236 Gene3D - 982 1236 IPR027417 -
Pte2g02691 1236 ProSitePatterns ABC transporters family signature. 1131 1145 IPR017871 GO:0005524|GO:0016887
Pte2g02691 1236 FunFam ABC transporter B family member 4 982 1235 - -
Pte2g02691 1236 SUPERFAMILY ABC transporter transmembrane region 656 969 IPR036640 GO:0005524|GO:0016020
Pte2g02691 1236 Pfam ABC transporter 1010 1159 IPR003439 GO:0005524
Pte2g02691 1236 SUPERFAMILY ABC transporter transmembrane region 7 323 IPR036640 GO:0005524|GO:0016020
Pte2g02691 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte2g02691 1236 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 318 - -
Pte2g02691 1236 ProSitePatterns ABC transporters family signature. 484 498 IPR017871 GO:0005524|GO:0016887
Pte2g02691 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 669 956 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte2g02691 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 586 IPR027417 -
Pte2g02691 1236 CDD ABC_MTABC3_MDL1_MDL2 992 1231 - -
Pte2g02691 1236 Gene3D ABC transporter type 1, transmembrane domain 6 635 IPR036640 GO:0005524|GO:0016020
Pte2g02691 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 992 1228 IPR003439 GO:0005524
Pte2g02691 1236 PANTHER ABC TRANSPORTER B FAMILY 6 585 IPR039421 -
Pte2g02691 1236 CDD ABC_MTABC3_MDL1_MDL2 345 586 - -
Pte2g02691 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 983 1231 IPR027417 -
Pte2g02691 1236 CDD ABC_6TM_Pgp_ABCB1_D2_like 658 972 - -
Pte2g02691 1236 Pfam ABC transporter transmembrane region 668 938 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte2g02691 1236 Pfam ABC transporter transmembrane region 33 283 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02691 Pte-Chr2 45789630 45794216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02691 20 589 Calmodulin-binding Proteins AT2G36910 35.233 6.14e-103 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02691 K05658 - qsa:O6P43_023937 1691.4