Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02687 ATGCGACAAGTTGTGGCAGCTAGTCAGTTCCTTCCTCCTTATTATGCCTACATGACTGGTGTCCCTACAACATTGTCTGGTCTTATTGATATTCTATATATACACAAGCACACGCCTCTCGTGTGTGCATATATATACACACACATAAGTATACTACGGCTCATTAACCCGGAGGAATTGAAGAAGATATTTGACATGGGTCTGTCACACTTCCCTACTGCATCAGAAGGGGTACTCCCAGTGCTTATGGTGAACATAGCTCTTTCGGTTTCTCATTTGGAAAACATGGTAAGGTCTATGCTCCAAGCATTGAGCTCGGCTGAAAGTGATTCAACTACGGAGGAAGATTTAGATGGTGCTTACGCTGAGGATCATTCGACGGGAAGGAGAATCTCCATAACCCAATTCAAATCCTTATCCAGCACCAGCTCTACAAAGGACACAATCAACAGTAATACATGTACAACCATCGGTAGTAGCAGCGGTGAGGCCGCCGCGGTGGAGTGTTGCGTGTGCCTTTCTGGGTTTGAAGCTGAGGAGGAGGTGAGTGAATTGTCGTGCAAGCATTTCTTCCACAAAGTTTGCTTAGACAAGTGGTTTGACAACAACCACAGCACTTGCCCTCTTTGCCGTTCCATTGACTAG 645 0.4574 MRQVVAASQFLPPYYAYMTGVPTTLSGLIDILYIHKHTPLVCAYIYTHISILRLINPEELKKIFDMGLSHFPTASEGVLPVLMVNIALSVSHLENMVRSMLQALSSAESDSTTEEDLDGAYAEDHSTGRRISITQFKSLSSTSSTKDTINSNTCTTIGSSSGEAAAVECCVCLSGFEAEEEVSELSCKHFFHKVCLDKWFDNNHSTCPLCRSID* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02687 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 214 IPR013083 -
Pte2g02687 214 PANTHER - 66 212 IPR044249 -
Pte2g02687 214 SMART ring_2 169 210 IPR001841 -
Pte2g02687 214 SUPERFAMILY RING/U-box 168 212 - -
Pte2g02687 214 ProSiteProfiles Zinc finger RING-type profile. 169 211 IPR001841 -
Pte2g02687 214 Pfam Ring finger domain 168 211 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02687 Pte-Chr2 45760590 45761234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02687 66 212 C3H Transcription Factor Family AT2G04240 36.913 3.92e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02687 K16285 - tcc:18609579 170.629