Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02683 ATGAACAGCTTAAACTGTCAATCCTTTCTCATCGTAACTTGCCTTTGCCATTTCAGTTTTACCTTTGTCCATGCACAGCATGCTCCAGATCCCAGGGTGAGGATGAGCCTCGACCTCTCACTCTACATCATGATCATAGCCCTTGTTTCCGCTTTCGCATTCATGGGACTCTTTTTCTCCCTCTCCCTTCGCTATTGTTGGCGTTCCCAAGCTCATCATCAACCTACCCTTCGAAACCCCACCCCCGGTTTCAACTCCAGTCCCCATGGAGTGGACCCGACTGTCGTCCACTCCTTTCCGATCCTAGTCTATTCCACCATCAAACAACATAAGATAGGCAAAGGTGTACATGAGTGCGCAGTTTGCTTGAGCGAATTCCGAGACTGTGATACCCTCATGTTGTTACCGAAATGCGATCACGTATTTCACCCTCATTGCATTCATGCCTGGTTGGCTTTCCATGTCACTTGCCCAGTTTGCCGCGCAAACCTCACCGAAAACCTGGAATCATGTGGATGTGGGACCACCGTCGTGCAAATCCCCACCTATACCGCAAACGAGGCCATTGACCCGGACACGGTAAATTCCAACGCAAACAGCAGCGGGCATGAACCCGATGACAGTGAGAAAGGGCAGCAGCAAGTGGTGATGACCGTCTACCCAGTTGAGGGCAGTGATGTAGGTTCACAACAAACGGCGGTTAATATCCAGGATGACGGTTGCATCAGGCCAAAAGAGAACGGTCAGCCAGAGTCTAGAATGTCGTGCAACTTGCAAAGGTCGCATTCGACTGGTGACTCGGTGGTTCAACCTGAAAATAATATGGAGCTGTACACGGTGAGGTTGCCTGAAGAAGTTAGGATGCAGCGTGCTCACATGGCTACGTGA 888 0.5045 MNSLNCQSFLIVTCLCHFSFTFVHAQHAPDPRVRMSLDLSLYIMIIALVSAFAFMGLFFSLSLRYCWRSQAHHQPTLRNPTPGFNSSPHGVDPTVVHSFPILVYSTIKQHKIGKGVHECAVCLSEFRDCDTLMLLPKCDHVFHPHCIHAWLAFHVTCPVCRANLTENLESCGCGTTVVQIPTYTANEAIDPDTVNSNANSSGHEPDDSEKGQQQVVMTVYPVEGSDVGSQQTAVNIQDDGCIRPKENGQPESRMSCNLQRSHSTGDSVVQPENNMELYTVRLPEEVRMQRAHMAT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02683 295 SUPERFAMILY RING/U-box 118 170 - -
Pte2g02683 295 MobiDBLite consensus disorder prediction 188 202 - -
Pte2g02683 295 FunFam E3 ubiquitin-protein ligase ATL6 82 167 - -
Pte2g02683 295 PANTHER RING FINGER DOMAIN-CONTAINING 36 169 - -
Pte2g02683 295 MobiDBLite consensus disorder prediction 250 269 - -
Pte2g02683 295 SMART ring_2 119 160 IPR001841 -
Pte2g02683 295 MobiDBLite consensus disorder prediction 240 269 - -
Pte2g02683 295 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Pte2g02683 295 MobiDBLite consensus disorder prediction 188 212 - -
Pte2g02683 295 Pfam Ring finger domain 118 161 IPR001841 -
Pte2g02683 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 167 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02683 Pte-Chr2 45752248 45753373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02683 11 289 Rapid Response to Elicitors AT3G05200 37.024 8.89e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02683 K10664 - qsa:O6P43_030504 185.652