Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02659 ATGTGTGGTATTCTCGCAGTGTTGGGATGCACCGACAACTCTCAAGCCAAGCGCTCTCGCATCATCGAGTTGTCTCGCAGGTTGCGACATAGAGGTCCTGATTGGAGTGGCTTGCATTATTATGAGGACTGTTACCTTGCCCATCAACGGCTGGCTATTATAGATCCTACTTCAGGGGATCAACCTCTGTACAACGAAGACAAAACTATTGCCGTTACGGTGAATGGGGAGATATATAACCACAAAGAATTGAGGGGAAAACTCAAAGCTCATCAGTTCCGGACTGGAAGTGACTGTGAAGTCATTGCTCATCTATATGAAGATTATGGAGAGAACTTTGTGGATTTGTTGGATGGCATGTTTTCTTTTGTCCTTCTTGACAAGCGTGACAAAAGTTTCATTGCAGCTCGGGATGCTATTGGTATCACACCGCTATATATGGGGTGGGGTCTTGATGGATCAATATGGTTCGCATCAGAGATGAAAGCTTTGAGTGATGACTGCGAAAGATTCATCTCTTTCCCTCCTGGGCATATCTATTCCAGCAAACAGGGAGAGATAAGAAGATGGTATAACCCACCATGGTATTCTGAGATCATTCCATCTACTCCATACAACGCTTTGGTTTTACGTAAAGCCTTTGAGAAGGCTGTAGTTAAGAGACTCATGACAGATGTACCATTCGGTGTTCTTTTGTCGGGAGGGTTAGATTCATCTCTTGTTGCTGCTGTTGCTTGCCGCCATTTGGCGGACTCTGATGCTGCTAAACAGTGGGGATCACAGCTACATACCTTTTGTGTTGGTCTGAAGGGTTCTCCTGATCTGCTAGCTGCTAGGGAGGTTAGCGATTATCTTGGAACTCGGCACTATGAATTTCACTTCACCGTTCAGGAAGGTTTAGATGCTCTTGAAGAAGTCATTTACCATATTGAAACATATGATGTTACTACGGTCAGAGCAAGTACTCCAATGTTTTTGATGTCGAGAAAAATCAAATCCTTGGGAGTCAAGATGGTTCTTTCTGGAGAAGGTTCTGATGAAATATTTGGTGGTTACTTGTATTTCCACAAAGCCCCTAACAAGGAAGAGTTTCACCAGGAAACTTGTAGAAAGATCAAAGCTCTTCATCTTTATGACTGCTTGCGAGCCAATAAAGCGACTTCAGCATGGGGTGTGGAGGCTCGTGTTCCTTTCTTGGATAAAGAATTCATCAATGTTGCAATGAGCATTGATCCAGAGTGCAAAATGGTTAGGCCCGATATTGGTCGCATCGAGAAGTGGGTCTTACGCAATGCTTTTGATGATGAACAGAGTCCATATTTACCAAAGCACATTCTGTATCGGCAAAAGGAACAGTTTAGTGATGGTGTTGGGTACAGCTGGATTGATGGTTTGAAAGAACATGCTAAGAAACAAGTTACAGATGCAATGTTATTGCACGCAAGTTTTGTTTACCCAGAGAATACTCCGACCACAAAAGAAGCATACTACTATCGGACAATATTCGAGAAATTCTTTCCAAAGAATTCTGCTAGATCAACAGTTCCCGGAGGTCCCAGCATAGCATGCAGTACAGCAAAAGCAGTGGAGTGGGATGCAGCATGGTCAAAAAATCTTGATCCCTCTGGTCGTGCTGCAGTAGGTGTCCATGCGGCAGCATATGAGGAAGCAGTAGAGGCAGCAAATACCAATTTGATCAAAGGAGGATCTCCCACTGAACCACAAGGAATTATACAAAAGTCTTCCGCTGCAGTAGTGTAG 1761 0.4384 MCGILAVLGCTDNSQAKRSRIIELSRRLRHRGPDWSGLHYYEDCYLAHQRLAIIDPTSGDQPLYNEDKTIAVTVNGEIYNHKELRGKLKAHQFRTGSDCEVIAHLYEDYGENFVDLLDGMFSFVLLDKRDKSFIAARDAIGITPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGEIRRWYNPPWYSEIIPSTPYNALVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVACRHLADSDAAKQWGSQLHTFCVGLKGSPDLLAAREVSDYLGTRHYEFHFTVQEGLDALEEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKATSAWGVEARVPFLDKEFINVAMSIDPECKMVRPDIGRIEKWVLRNAFDDEQSPYLPKHILYRQKEQFSDGVGYSWIDGLKEHAKKQVTDAMLLHASFVYPENTPTTKEAYYYRTIFEKFFPKNSARSTVPGGPSIACSTAKAVEWDAAWSKNLDPSGRAAVGVHAAAYEEAVEAANTNLIKGGSPTEPQGIIQKSSAAVV* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02659 586 Gene3D HUPs 195 514 IPR014729 -
Pte2g02659 586 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Pte2g02659 586 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Pte2g02659 586 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Pte2g02659 586 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Pte2g02659 586 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Pte2g02659 586 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Pte2g02659 586 Pfam Asparagine synthase 210 360 IPR001962 GO:0004066|GO:0006529
Pte2g02659 586 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 201 484 - -
Pte2g02659 586 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Pte2g02659 586 PIRSF Asn_synthetase_glu-h 1 362 IPR006426 GO:0004066|GO:0006529
Pte2g02659 586 PIRSF Asn_synthetase_glu-h 357 516 IPR006426 GO:0004066|GO:0006529
Pte2g02659 586 PANTHER ASPARAGINE SYNTHETASE 1 555 - -
Pte2g02659 586 NCBIfam asparagine synthase (glutamine-hydrolyzing) 2 366 IPR006426 GO:0004066|GO:0006529
Pte2g02659 586 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02659 Pte-Chr2 45614678 45619526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02659 61 164 PRT Gene Family AT4G38880 36.441 7.03e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02659 K01953 - aew:130785348 1048.11