Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02649 ATGGCAGCAGTAATGGATAAATATAATAGTTCGAAGGCACCGGATTTATCAGACCATTGCAGCGAAGAACTGATGAAAGCACTTGAACCTTTTATGAAAAGTGCTTCATCTACCTCTTCCTTCTTCGCTTGCTCACCATCTTTTTCTTCACGTTCTCCATCTTCGTCCTTCTCCTCATACCCTCTTTGTTGTTATTCTTCATTCTCAAATTCACAGCACAACCTAAGCCCGCATATCTACTCCCCATCGGGCACTCTTATGCTTTCTCAAGGGTTCTCAGGCTATGACCAGGTAAGCCTTGGGCAGAGCAGTTTACTTGGGCTTAACCAGATTACCCCCTCTCAGATTCTCCAAATTCAAGCTCAGATCCAGCAGCAGAACCCGCATTTGAAGGAGCAAAAACCCAAAAACATCGATCTCCTCAGTCCAAAGTCTATCCGCATGAAGCATGTCAGTACTCCTCAGAGACCAGCAAAACTTTATCGCGGAGTGAGACAGCGCCACTGGGGCAAATGGGTGGCTGAGATCAGACTCCCTAAGAATCGAACCCGTCTCTGGCTTGGCACTTTCGATACGGCGGAAGAGGCGGCTTTGGCATACGACAACGCAGCTTACACGCTCAGGGGAGATTTTGCTCGTTTAAATTTCCCTCATCTGCGGCACGACGGAGGTCATGTCTACGGTGAATTCGGTGTTTGCAAGCCTCTTCATTCGTCAGTGGATGCTAAGCTCCAAGCAATTTGTCGAAACTTGGGTAATTCGCACAAACAGGGGAAGACAGGAAAGCTGCCCTGTTCTGTAGTCGACGAGAAGCCAGTGATATCGCCTCCATCACAGGAAAATTTCAAATGTGAAATCGAGTCTCCAGAACCGATAGATTACAAAATGGAGTCTTTGTCATCATCTCCCGCCGTTTCGGATGAATCATCAGCTGGTTCTTCTTCACCACAATCAAACATAACTCTGCTGGACTTCTCTGAATCTAATAAGTGGGATTTGACCGAGGATTTTGGTCTAGAGAAGTACCCTTCAGTGGAAATTGATTGGGCAGCCATCTGA 1059 0.4684 MAAVMDKYNSSKAPDLSDHCSEELMKALEPFMKSASSTSSFFACSPSFSSRSPSSSFSSYPLCCYSSFSNSQHNLSPHIYSPSGTLMLSQGFSGYDQVSLGQSSLLGLNQITPSQILQIQAQIQQQNPHLKEQKPKNIDLLSPKSIRMKHVSTPQRPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYTLRGDFARLNFPHLRHDGGHVYGEFGVCKPLHSSVDAKLQAICRNLGNSHKQGKTGKLPCSVVDEKPVISPPSQENFKCEIESPEPIDYKMESLSSSPAVSDESSAGSSSPQSNITLLDFSESNKWDLTEDFGLEKYPSVEIDWAAI* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02649 352 SMART rav1_2 160 223 IPR001471 GO:0003700|GO:0006355
Pte2g02649 352 MobiDBLite consensus disorder prediction 298 320 - -
Pte2g02649 352 Pfam AP2 domain 161 209 IPR001471 GO:0003700|GO:0006355
Pte2g02649 352 Gene3D AP2/ERF domain 160 218 IPR036955 GO:0003700|GO:0006355
Pte2g02649 352 MobiDBLite consensus disorder prediction 299 320 - -
Pte2g02649 352 FunFam Ethylene-responsive transcription factor 2 159 218 - -
Pte2g02649 352 CDD AP2 159 219 IPR001471 GO:0003700|GO:0006355
Pte2g02649 352 SUPERFAMILY DNA-binding domain 160 218 IPR016177 GO:0003677
Pte2g02649 352 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 352 - -
Pte2g02649 352 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Pte2g02649 352 PRINTS Ethylene responsive element binding protein signature 183 199 IPR001471 GO:0003700|GO:0006355
Pte2g02649 352 ProSiteProfiles AP2/ERF domain profile. 160 217 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02649 Pte-Chr2 45531149 45533217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02649 1 352 AP2-EREBP Transcription Factor Family AT1G78080 47.268 2.07e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g02649 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02649 K09286 - qsa:O6P43_030451 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02649 2 45531149 45533217 Pte2g02649 2 45531149 45533217 RCT