Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g02649 | ATGGCAGCAGTAATGGATAAATATAATAGTTCGAAGGCACCGGATTTATCAGACCATTGCAGCGAAGAACTGATGAAAGCACTTGAACCTTTTATGAAAAGTGCTTCATCTACCTCTTCCTTCTTCGCTTGCTCACCATCTTTTTCTTCACGTTCTCCATCTTCGTCCTTCTCCTCATACCCTCTTTGTTGTTATTCTTCATTCTCAAATTCACAGCACAACCTAAGCCCGCATATCTACTCCCCATCGGGCACTCTTATGCTTTCTCAAGGGTTCTCAGGCTATGACCAGGTAAGCCTTGGGCAGAGCAGTTTACTTGGGCTTAACCAGATTACCCCCTCTCAGATTCTCCAAATTCAAGCTCAGATCCAGCAGCAGAACCCGCATTTGAAGGAGCAAAAACCCAAAAACATCGATCTCCTCAGTCCAAAGTCTATCCGCATGAAGCATGTCAGTACTCCTCAGAGACCAGCAAAACTTTATCGCGGAGTGAGACAGCGCCACTGGGGCAAATGGGTGGCTGAGATCAGACTCCCTAAGAATCGAACCCGTCTCTGGCTTGGCACTTTCGATACGGCGGAAGAGGCGGCTTTGGCATACGACAACGCAGCTTACACGCTCAGGGGAGATTTTGCTCGTTTAAATTTCCCTCATCTGCGGCACGACGGAGGTCATGTCTACGGTGAATTCGGTGTTTGCAAGCCTCTTCATTCGTCAGTGGATGCTAAGCTCCAAGCAATTTGTCGAAACTTGGGTAATTCGCACAAACAGGGGAAGACAGGAAAGCTGCCCTGTTCTGTAGTCGACGAGAAGCCAGTGATATCGCCTCCATCACAGGAAAATTTCAAATGTGAAATCGAGTCTCCAGAACCGATAGATTACAAAATGGAGTCTTTGTCATCATCTCCCGCCGTTTCGGATGAATCATCAGCTGGTTCTTCTTCACCACAATCAAACATAACTCTGCTGGACTTCTCTGAATCTAATAAGTGGGATTTGACCGAGGATTTTGGTCTAGAGAAGTACCCTTCAGTGGAAATTGATTGGGCAGCCATCTGA | 1059 | 0.4684 | MAAVMDKYNSSKAPDLSDHCSEELMKALEPFMKSASSTSSFFACSPSFSSRSPSSSFSSYPLCCYSSFSNSQHNLSPHIYSPSGTLMLSQGFSGYDQVSLGQSSLLGLNQITPSQILQIQAQIQQQNPHLKEQKPKNIDLLSPKSIRMKHVSTPQRPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYTLRGDFARLNFPHLRHDGGHVYGEFGVCKPLHSSVDAKLQAICRNLGNSHKQGKTGKLPCSVVDEKPVISPPSQENFKCEIESPEPIDYKMESLSSSPAVSDESSAGSSSPQSNITLLDFSESNKWDLTEDFGLEKYPSVEIDWAAI* | 353 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g02649 | 352 | SMART | rav1_2 | 160 | 223 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02649 | 352 | MobiDBLite | consensus disorder prediction | 298 | 320 | - | - | |
Pte2g02649 | 352 | Pfam | AP2 domain | 161 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02649 | 352 | Gene3D | AP2/ERF domain | 160 | 218 | IPR036955 | GO:0003700|GO:0006355 | |
Pte2g02649 | 352 | MobiDBLite | consensus disorder prediction | 299 | 320 | - | - | |
Pte2g02649 | 352 | FunFam | Ethylene-responsive transcription factor 2 | 159 | 218 | - | - | |
Pte2g02649 | 352 | CDD | AP2 | 159 | 219 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02649 | 352 | SUPERFAMILY | DNA-binding domain | 160 | 218 | IPR016177 | GO:0003677 | |
Pte2g02649 | 352 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 4 | 352 | - | - | |
Pte2g02649 | 352 | PRINTS | Ethylene responsive element binding protein signature | 161 | 172 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02649 | 352 | PRINTS | Ethylene responsive element binding protein signature | 183 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Pte2g02649 | 352 | ProSiteProfiles | AP2/ERF domain profile. | 160 | 217 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g02649 | Pte-Chr2 | 45531149 | 45533217 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g02649 | 1 | 352 | AP2-EREBP Transcription Factor Family | AT1G78080 | 47.268 | 2.07e-83 | 254 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pte2g02649 | AP2 | 2e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g02649 | K09286 | - | qsa:O6P43_030451 | 358.992 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte2g02649 | 2 | 45531149 | 45533217 | Pte2g02649 | 2 | 45531149 | 45533217 | RCT |