Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02640 ATGGCGGATAACTCGGACTTATCGCCACTCGTTTCCCAATCACCGATCACTAACCACAGTGAGATCGACCTTGAAGCTGGTCCTGGTGAACAAATTCAGTGCCGAATTTGTCTTGAAACCGATGGTAGGGATTTCATAGCTCCTTGCAAGTGCAAGGGAACATCAAAGTACGTCCACAGAGAATGCTTAGACCACTGGCGAGCAGTGAAGGAAGGGTTGGCATTTGCTCACTGTACAACCTGCAAGGCTCCTTACCACTTGCGGGTCCATGGTGCAGCAGATAGGAAATGGAGAACCTTAAAATTCCGTTTTTTTGTTACGAGAGACATTTTATTTATCTTCCTGCTTGTCCAAATTGTCATTGCTTGTTTGGCTTATTTGGTTTCTTTAGTAGATGGTTATCATCAATATTGGCTTCGTCTTGCATGGGGTTTGGATAGCAAGATTACCTTTTACTACATATCTGGCGCGCTATTATTTTTTGCTTTACTTGGACTGTCTGGTTGCTTCATCACTTGTTATGATCGAAGGGTGCGAAGTGATTTGGCTCAACCTTGTCGAGAATTATGTCTTTGTTGCTGCCAGCCAGGAATTTGTGCAGATTGTCCTTTGCCGGGCACTCTTTGTATGTGGACCGATTGTACCACATGCTTTGAAAGCTGTGGAACAATGGCTAGTGAATGTAGTAGTTGTTTAGGAGGTGCTGGTGATGCGGGGCTTCCATTGTTATTTATCGTGGCCCTGATTTTTCTAGGACTTTTCACTGTAATTGGGATATTCTACAGCGTATTGGTGGCTACAATGGTTGGACAACGAGTTTGGCAGAGACACTATCACATCCTTGCGAAAAGGATGCTAACAAAAGAATATGTCGTGGAGGACATGGATGGTGAGGTGACTGGGTCAAATTGGTCTCCCCCACCTCTCCCACATGAGCATGTTCAGCAGCTGAAATCACTTGGCCTCCTGTGA 972 0.4506 MADNSDLSPLVSQSPITNHSEIDLEAGPGEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGLAFAHCTTCKAPYHLRVHGAADRKWRTLKFRFFVTRDILFIFLLVQIVIACLAYLVSLVDGYHQYWLRLAWGLDSKITFYYISGALLFFALLGLSGCFITCYDRRVRSDLAQPCRELCLCCCQPGICADCPLPGTLCMWTDCTTCFESCGTMASECSSCLGGAGDAGLPLLFIVALIFLGLFTVIGIFYSVLVATMVGQRVWQRHYHILAKRMLTKEYVVEDMDGEVTGSNWSPPPLPHEHVQQLKSLGLL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02640 323 SUPERFAMILY RING/U-box 30 86 - -
Pte2g02640 323 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
Pte2g02640 323 SMART ringv_2 33 82 IPR011016 GO:0008270
Pte2g02640 323 CDD RING_CH-C4HC3_MARCH 34 82 - -
Pte2g02640 323 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Pte2g02640 323 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 322 - -
Pte2g02640 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 94 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02640 Pte-Chr2 45432363 45437219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02640 1 323 C3H Transcription Factor Family AT2G22120 81.481 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02640 - - gmx:100820355 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02640 2 45432363 45437219 Pte2g02640 2 45432363 45437219 RCT