Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02634 ATGACCGGACGAAGAAACCAAATCAGTGTTCACGATGGCAGTCGATCATCAGAGAACATATCAGACTACTCAAAACATCAAGACCAGTTCCTTCCCATTGCAAACGTGAGCCGTCTCATGAAGAAGGCACTTCCAGACAATGCCAAAATTTCCAAAGAGGCCAAGGAAACAGTGCAAGAATGCGTTTCTGAGTTCATAAGCTTCATCACTGGTGAAGCATCTGACAAGTGTCAAAGAGAGAAAAGGAAGACAATAAACGGGGATGATCTTCTTTGGGCTATGACAACACTTGGTTTTGAAAACTATGTTGAACCTTTGAAGGTTTATCTCAACACATTCAGGGATACAGAGGGGGACAAGAATCTAATTGCTAGACAAGAAGACAGCTCATCGACACACTGA 402 0.4279 MTGRRNQISVHDGSRSSENISDYSKHQDQFLPIANVSRLMKKALPDNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVEPLKVYLNTFRDTEGDKNLIARQEDSSSTH* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02634 133 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Pte2g02634 133 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Pte2g02634 133 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Pte2g02634 133 SUPERFAMILY Histone-fold 27 129 IPR009072 GO:0046982
Pte2g02634 133 MobiDBLite consensus disorder prediction 1 17 - -
Pte2g02634 133 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Pte2g02634 133 Gene3D Histone, subunit A 18 133 IPR009072 GO:0046982
Pte2g02634 133 MobiDBLite consensus disorder prediction 1 22 - -
Pte2g02634 133 FunFam Nuclear transcription factor Y subunit B-3 19 133 - -
Pte2g02634 133 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pte2g02634 133 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 124 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02634 Pte-Chr2 45370280 45370681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02634 13 128 CCAAT-HAP3 Transcription Factor Family AT4G14540 76.923 3.80e-61 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte2g02634 CBFD_NFYB_HMF 1.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02634 K08065 - tcc:108660480 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02634 2 45370280 45370681 Pte2g02634 2 45370280 45370681 RCT