Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02624 ATGGGTTGCGCCTTCGGCAGACCATCTTTGCACTCTCCAAATCCGGACCTTGAGAACTTGAAGCAGAGAAACGGCTATGTCAAGGGGCGCGGTGAAGTTGCACGTAATGAGCAGAGGCAGTTGAGATCCCAACCTGGTCGGTCCTTGAAGTCTCGGCTGGAAAATGGGACTGTGGCTGGTAAGCAAATTGCAAATGCTGGAGGGAATGGTGGTGAAGGAGGAGAGAGAACTCTCGCAAACGACATGGAGAGCAGGAAGACTGATGGTGGGAATGTTCTCAAGAGAATTTCACAGTCGAAGAAGATTGGGGAAGATGACGTAATTGATGGATGGCCTAAATGGCTGGTTGATAATGTTCCTAAACATGCTTTGGATGGCTTGGTTCCAAAATCTGCCGATTCCTATGATAAACTAGCTAAGATAGGACATGGAACATACAGTAATGTCTACAAAGCTCGAGAAAGGGGAACGGGAAAGATCGTTGCTCTTAAGAAAGTAAGATTTGATACCTCAGAGCCTGAAAGTATCAAATTTATGGCAAGAGAAATCATGATATTACAGAAGCTAGATCACCCCAATGTGATCAAGCTTAGAGGGCTAGCAACATCAAGGATGCATTATAGCCTTTACTTAGTTTTTGGTTTCATGCGTTCAGACTTGACACACGTCATCTCCCGCTCTAACCAGAAACTCACTGAAGCACAGATCAAGTGTTATATGAAGCAGCTGCTCTCAGGTCTCCAGCACTGTCATGAGAGGGGTATCTTACACCGGGATATCAAAGCTTCAAATTTGCTAATTGATAAAAAAGGGAATCTAAAAATTGCAGACTTTGGGCTGGCAAATTTTTATTATCCCAAACCAACACGACCATTAACAAGCCGAGTGGTAACTCTTTGGTATAGAGCTCCTGAGTTGCTTTTAGGGTCAACAGATTATGGGGTTGGCGTTGATATCTGGAGTGCAGGTTGCCTGCTTGCAGAAATGTTTATAGGAAGGCCAATAATGCCTGGGAGGAATGAGATTGAGCAACTTCACAGGATCTTCAAGCTTTGTGGTTCACCCTCTGATGATTATTGGAAAAGAATGAAACTGCCGACCAGTTTCCGACCTCAACATAGTTATAAGTCTAGCCTAGAAGACGCCTTCAAGGCTTTCCCAAGCAGTGCACGTGATCTATTGATCACACTTCTAGACCTCGATCCTGCACGTCGTGGCACTGCTGAATCTGCTCTCCTAAGTCAATTCTTCAGTTCAAGTCCATTGCCGTGCGATATCGTAGAGCTGCCAGCAACCCACAAGGATGAGGCATCGAAAATCAATATTCGCAAGAAGCGCAGGTCTTTCAAGAAAAAGCAGTTTCAAGCAGATGAGGTTCATCCAATAGCTGAAGGTGATGATAAAATTAACAGGGAAGATTCTGATTCCGTCAAATCGGAGAAGGTTGGGGAGTTAATCAGTCTGAGCCAAGAACTGATACACAGCGGAAGCAGTGGTTCTTCTGGTTCTAAATTTTTTGCAAATGATACTAGCATGCCTGGTTCCCTGACTCCAGCTCTCCAGCCTTCTAAGATCGCAATCTCCAGGACTGAGTCTCACCCTAATGCTCTTAAGAATATCAAAAACTATACTGATCACTTACAGGCCTCCATTACTGATATTATCAGTCGTGATGGAGATGGCAAACAACTTGGTCAATATAGCAGGTCCCTTTCTACATTAAATTTTCGATCACTAGATCCAGACAAGATATCCAAAGTCCTTGGTTTTGATGAAGATCATTAA 1785 0.4403 MGCAFGRPSLHSPNPDLENLKQRNGYVKGRGEVARNEQRQLRSQPGRSLKSRLENGTVAGKQIANAGGNGGEGGERTLANDMESRKTDGGNVLKRISQSKKIGEDDVIDGWPKWLVDNVPKHALDGLVPKSADSYDKLAKIGHGTYSNVYKARERGTGKIVALKKVRFDTSEPESIKFMAREIMILQKLDHPNVIKLRGLATSRMHYSLYLVFGFMRSDLTHVISRSNQKLTEAQIKCYMKQLLSGLQHCHERGILHRDIKASNLLIDKKGNLKIADFGLANFYYPKPTRPLTSRVVTLWYRAPELLLGSTDYGVGVDIWSAGCLLAEMFIGRPIMPGRNEIEQLHRIFKLCGSPSDDYWKRMKLPTSFRPQHSYKSSLEDAFKAFPSSARDLLITLLDLDPARRGTAESALLSQFFSSSPLPCDIVELPATHKDEASKINIRKKRRSFKKKQFQADEVHPIAEGDDKINREDSDSVKSEKVGELISLSQELIHSGSSGSSGSKFFANDTSMPGSLTPALQPSKIAISRTESHPNALKNIKNYTDHLQASITDIISRDGDGKQLGQYSRSLSTLNFRSLDPDKISKVLGFDEDH* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02624 594 Gene3D Transferase(Phosphotransferase) domain 1 218 459 - -
Pte2g02624 594 SMART serkin_6 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02624 594 MobiDBLite consensus disorder prediction 1 23 - -
Pte2g02624 594 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Pte2g02624 594 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Pte2g02624 594 ProSiteProfiles Protein kinase domain profile. 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02624 594 MobiDBLite consensus disorder prediction 61 89 - -
Pte2g02624 594 PANTHER CELL DIVISION PROTEIN KINASE 133 423 - -
Pte2g02624 594 Pfam Protein kinase domain 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g02624 594 SUPERFAMILY Protein kinase-like (PK-like) 130 424 IPR011009 -
Pte2g02624 594 Gene3D Phosphorylase Kinase; domain 1 125 217 - -
Pte2g02624 594 FunFam Putative serine/threonine-protein kinase 218 454 - -
Pte2g02624 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02624 Pte-Chr2 45248688 45252349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02624 130 453 Core Cell Cycle Gene Families AT5G10270 46.199 1.16e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte2g02624 Pkinase 4.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02624 K08819 - qsa:O6P43_030391 665.225