Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02620 ATGCATCCACTGCTCTTACCTTACGAACAAGGAAGCAACACAATGCAACTTTCTAATCTATTTCCAGGTTTGAACAGACAGAGGGAAATGTCTGAAATGGTTTCTGCTTTGACACACGTTATATCAGGTGATGTGGTGGATCATGGTAACATTGGTGAAGGTAGTGCCATCAAAGACGCTCTTGCAACAACAAGGTTGCCTGCAACTTCTGGCTCAGCGACGCTGTCTTCCTCGTCATTAACCTGTTCTTCTTTTAGATCGCATGTGGATAGAAGCGGTCATAAGAGAGGAAGAGAAGACGGAGGCGGTGGAGCGCGGTGTGAAATGGTGACAAAATTTTGCAGACCTTCTAGTGACTTTCACTTTCCACGTGGAAGCTCTCCCTCCATTCTTACAAGAACCCCGGCAAGTAGTAGCATCTCGAACGACAACATGGCATTGACACAAACAGCAGTGACCCCTGGATATGAATATAGCAGAAACAACGTAAGTCAGGAACCAAGAAGAAAATACAGAGGAGTGAGACAGAGACCATGGGGCAAATGGGCAGCTGAAATTAGAGATCCGTTCAAGGCTGCCAGAGTTTGGTTAGGTACATTTGAAACAGCTGAAGCAGCTGCTCGAGCCTACGACGAAGCTGCCTTGAGATTTAGAGGCAACAAGGCAAAACTGAATTTCCCAGAAAACGTCACGCTTAGGCAACCAACGATGAGTGCGGCGTGTACCCAGTTTAGCATTTCCAATGCTTCAAGCAATCTCGTGTCCATGCCCATGTCTATCATGCCAATATTTCACACTCAAGCTGAACTTCAGAGTCAGAGTCAGAGAATCGATTTTCAGAGACAATCCACAACTTCATTCAACCACATGGTCATAGAACCTGCAATGGCTTCCCAAGTTCAGCCATCCTTTTCATCCACACAATTATCCGTATCCTCCATGTCGCCTCCTTCTACTGTGTCTGTTTCTTCCGCTACTTCCGCGACAGGGTCACTTCCTTTGTCTTACTTTGTCCAGCCACCAGATCAATTGAGAATGGTCGCTGATCAACACGCAAGCAGTTCGAAACTTTAA 1074 0.4618 MHPLLLPYEQGSNTMQLSNLFPGLNRQREMSEMVSALTHVISGDVVDHGNIGEGSAIKDALATTRLPATSGSATLSSSSLTCSSFRSHVDRSGHKRGREDGGGGARCEMVTKFCRPSSDFHFPRGSSPSILTRTPASSSISNDNMALTQTAVTPGYEYSRNNVSQEPRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPTMSAACTQFSISNASSNLVSMPMSIMPIFHTQAELQSQSQRIDFQRQSTTSFNHMVIEPAMASQVQPSFSSTQLSVSSMSPPSTVSVSSATSATGSLPLSYFVQPPDQLRMVADQHASSSKL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02620 357 FunFam Ethylene-responsive transcription factor 2 169 228 - -
Pte2g02620 357 ProSiteProfiles AP2/ERF domain profile. 170 227 IPR001471 GO:0003700|GO:0006355
Pte2g02620 357 PRINTS Ethylene responsive element binding protein signature 171 182 IPR001471 GO:0003700|GO:0006355
Pte2g02620 357 PRINTS Ethylene responsive element binding protein signature 193 209 IPR001471 GO:0003700|GO:0006355
Pte2g02620 357 PANTHER DNA-BINDING DOMAIN 141 295 IPR044808 GO:0003700|GO:0009873
Pte2g02620 357 SMART rav1_2 170 233 IPR001471 GO:0003700|GO:0006355
Pte2g02620 357 SUPERFAMILY DNA-binding domain 170 228 IPR016177 GO:0003677
Pte2g02620 357 Gene3D AP2/ERF domain 169 229 IPR036955 GO:0003700|GO:0006355
Pte2g02620 357 MobiDBLite consensus disorder prediction 125 144 - -
Pte2g02620 357 CDD AP2 170 229 IPR001471 GO:0003700|GO:0006355
Pte2g02620 357 Pfam AP2 domain 170 219 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02620 Pte-Chr2 45221418 45223636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02620 6 315 AP2-EREBP Transcription Factor Family AT5G64750 38.782 1.56e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte2g02620 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02620 - - qsa:O6P43_030387 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02620 2 45221418 45223636 Pte2g02620 2 45221418 45223636 RCT